CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw.431.18.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw.431.18.1
T140184_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw.431.18.1
C2H2 ZF
223
245
LKCTYCDKMFSKNFDLQQHIRSH
gw.431.18.1
C2H2 ZF
251
273
FQCIVCGRAFAQKSNVKKHMQTH
gw.431.18.1
C2H2 ZF
339
361
YQCHYCQATFKTYFQLKSHMTQH
gw.431.18.1
C2H2 ZF
397
419
YRCHMCNKQFPSLYELGVHQYSH
gw.431.18.1
C2H2 ZF
460
482
YSCPHCDKVFPCERYLRRHLPTH
gw.431.18.1
C2H2 ZF
488
510
HVCNVCDKRFKTEHYLKMHALIH
gw.431.18.1
C2H2 ZF
516
538
YSCTQCNATFNRKDKLKRHMLIH
gw.431.18.1
C2H2 ZF
544
571
YKCPFKTHTGCTKEFNRPDKLKAHIISH
gw.431.18.1
C2H2 ZF
577
599
FKCKDCGKSFSRKPHLQEHERMH
gw.431.18.1
C2H2 ZF
605
626
IRCNTCRKGFAREKYLRDHRCR
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sakowv30012466m.g
Saccoglossus kowalevskii
Sakowv30012466m.g
N
0.769