CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Ocbimv22007920m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22007920m.g
T140684_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22007920m.p
C2H2 ZF
522
545
LTCQICLNKTFTASATLMYHYRSH
Ocbimv22007920m.p
C2H2 ZF
551
573
FVCLLCRTSFTRQHSLNYHMLIH
Ocbimv22007920m.p
C2H2 ZF
579
601
FTCKDCGRKFRHPSHFKEHLRRH
Ocbimv22007920m.p
C2H2 ZF
607
630
FECKDCPQKFKTRNTYKRHLKTRH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ocbimv22028207m.g
Octopus bimaculoides
Ocbimv22028207m.g
N
0.815
CGI_10028629
Crassostrea gigas
CGI_10028629
N
0.795
SMAR003031
Strigamia maritima
SMAR003031
N
0.784