CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22030409m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22030409m.g
T141754_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22030408m.p
C2H2 ZF
220
242
FKCEYCKKMFSQACHLTQHIRTH
Ocbimv22030408m.p
C2H2 ZF
248
270
FKCDYCQKAFTLRGDLNRHIRIH
Ocbimv22030408m.p
C2H2 ZF
276
298
FHCPQCPKAFTLRGDLTRHVKIH
Ocbimv22030408m.p
C2H2 ZF
305
328
FKCNKCEKRFTSLRTLSMHCRNVH
Ocbimv22030408m.p
C2H2 ZF
334
356
YRCKYCSDSFPALSHLIKHMRLH
Ocbimv22030408m.p
C2H2 ZF
1348
1370
YLCNVCNQSFVERLHLVKHLITH
Ocbimv22030408m.p
C2H2 ZF
1403
1425
YSCKHCNKVFTHMHQLLKHMAVH
Ocbimv22030408m.p
C2H2 ZF
1457
1479
LQCPVCRKTFLHSSLLKSHVLTH
Ocbimv22030408m.p
C2H2 ZF
1485
1507
FACQYCDKSFAQSCHLTQHIRTH
Ocbimv22030408m.p
C2H2 ZF
1513
1535
FACSYCHKAFSLRGDLNRHIRTH
Ocbimv22030408m.p
C2H2 ZF
1541
1563
YKCTLCEKAFALKGDLTRHKNTH
Ocbimv22030409m.p
C2H2 ZF
220
242
FKCEYCKKMFSQACHLTQHIRTH
Ocbimv22030409m.p
C2H2 ZF
248
270
FKCDYCQKAFTLRGDLNRHIRIH
Ocbimv22030409m.p
C2H2 ZF
276
298
FHCPQCPKAFTLRGDLTRHVKIH
Ocbimv22030409m.p
C2H2 ZF
305
328
FKCNKCEKRFTSLRTLSMHCRNVH
Ocbimv22030409m.p
C2H2 ZF
334
356
YRCKYCSDSFPALSHLIKHMRLH
Ocbimv22030409m.p
C2H2 ZF
1348
1370
YLCNVCNQSFVERLHLVKHLITH
Ocbimv22030409m.p
C2H2 ZF
1403
1425
YSCKHCNKVFTHMHQLLKHMAVH
Ocbimv22030409m.p
C2H2 ZF
1457
1479
LQCPVCRKTFLHSSLLKSHVLTH
Ocbimv22030409m.p
C2H2 ZF
1485
1507
FACQYCDKSFAQSCHLTQHIRTH
Ocbimv22030409m.p
C2H2 ZF
1513
1535
FACSYCHKAFSLRGDLNRHIRTH
Ocbimv22030409m.p
C2H2 ZF
1541
1563
YKCTLCEKAFALKGDLTRHKNTH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action