CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22032230m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22032230m.g
T141781_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22032230m.p
C2H2 ZF
957
979
YKCTECDYCTVKKVNWYKHRKKH
Ocbimv22032230m.p
C2H2 ZF
985
1007
HSCIKCNYKATTSSNLKRHMAIH
Ocbimv22032230m.p
C2H2 ZF
1013
1036
YKCNQCSHYFRQKIHLERHMKYKH
Ocbimv22032230m.p
C2H2 ZF
1078
1100
FTCGDCGLVTMSKKDLKQHAKFH
Ocbimv22032230m.p
C2H2 ZF
1136
1159
FKCGLCEYRGSQKEHVLRHMKSRH
Ocbimv22032230m.p
C2H2 ZF
1194
1217
FACNHCTMKFSKLINLYKHLHTQH
Ocbimv22032230m.p
C2H2 ZF
1229
1251
FYCVVCDFKTINKKNLLVHMRKH
Ocbimv22032230m.p
C2H2 ZF
1263
1286
YSCVLCRYVNPKRRNLFQHMMKKH
Ocbimv22032231m.p
C2H2 ZF
957
979
YKCTECDYCTVKKVNWYKHRKKH
Ocbimv22032231m.p
C2H2 ZF
985
1007
HSCIKCNYKATTSSNLKRHMAIH
Ocbimv22032231m.p
C2H2 ZF
1013
1036
YKCNQCSHYFRQKIHLERHMKYKH
Ocbimv22032231m.p
C2H2 ZF
1078
1100
FTCGDCGLVTMSKKDLKQHAKFH
Ocbimv22032231m.p
C2H2 ZF
1136
1159
FKCGLCEYRGSQKEHVLRHMKSRH
Ocbimv22032231m.p
C2H2 ZF
1194
1217
FACNHCTMKFSKLINLYKHLHTQH
Ocbimv22032231m.p
C2H2 ZF
1229
1251
FYCVVCDFKTINKKNLLVHMRKH
Ocbimv22032231m.p
C2H2 ZF
1263
1286
YSCVLCRYVNPKRRNLFQHMMKKH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action