CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22035427m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22035427m.g
T141958_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22035426m.p
C2H2 ZF
13
35
VQCQVCAKTLNNPSALAKHKLTH
Ocbimv22035426m.p
C2H2 ZF
41
63
YVCHICSKAFKRQDHLNGHLVTH
Ocbimv22035426m.p
C2H2 ZF
69
94
YACHFEGCDKSYCDNRSLRRHLENHH
Ocbimv22035426m.p
C2H2 ZF
395
417
VKCNLCSKRFKNIPALNGHMRQH
Ocbimv22035426m.p
C2H2 ZF
1482
1506
FRCDYPDCSLIFNSRQVLNNHMRIH
Ocbimv22035426m.p
C2H2 ZF
1550
1572
YPCKLCGKVFAKIKSRCAHMKSH
Ocbimv22035427m.p
C2H2 ZF
56
78
VQCQVCAKTLNNPSALAKHKLTH
Ocbimv22035427m.p
C2H2 ZF
84
106
YVCHICSKAFKRQDHLNGHLVTH
Ocbimv22035427m.p
C2H2 ZF
112
137
YACHFEGCDKSYCDNRSLRRHLENHH
Ocbimv22035427m.p
C2H2 ZF
438
460
VKCNLCSKRFKNIPALNGHMRQH
Ocbimv22035427m.p
C2H2 ZF
1525
1549
FRCDYPDCSLIFNSRQVLNNHMRIH
Ocbimv22035427m.p
C2H2 ZF
1593
1615
YPCKLCGKVFAKIKSRCAHMKSH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action