CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30014666m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30014666m.g
T142261_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23937889_peptide
C2H2 ZF
77
99
YICEKCDKIFTSVEDITKHTESH
23937889_peptide
C2H2 ZF
105
128
YHCCHCTKQFDARCHLVRHMMMYH
23937889_peptide
C2H2 ZF
134
156
YPCLQCKLVFKTEAELVEHWKSH
23937889_peptide
C2H2 ZF
159
181
HKCNNCEKEFRTSALLRRHAKKH
23937889_peptide
C2H2 ZF
187
209
VRCKECGKMCASKGSLKRHITVH
23937889_peptide
C2H2 ZF
215
237
IPCNQCDRTFRTKAYLIAHAKSH
23937889_peptide
C2H2 ZF
242
264
YPCDKCDKVVSSKKNLKCHMKVH
23937889_peptide
C2H2 ZF
271
293
FPCPHCHEVLHGRYKFVTHLQTH
23937889_peptide
C2H2 ZF
299
321
YPCEQCGKKFATNYRWKRHMQIH
23937889_peptide
C2H2 ZF
327
349
YPCDLCDKRFTQKNNLEIHRRIH
23937889_peptide
C2H2 ZF
369
391
YPCEECEQIFSTKYYLHEHRRLH
23937889_peptide
C2H2 ZF
397
419
FPCEYCGKNFLKEGFLKIHMRTH
23937889_peptide
C2H2 ZF
425
447
FKCNLCDKAFTVKCNMLKHQVRH
23937889_peptide
C2H2 ZF
453
475
FQCEICGKMFPIESDLLAHQKMH
23937889_peptide
C2H2 ZF
481
503
FKCQYCGKGFAFVYRLNCHLRIH
23937889_peptide
C2H2 ZF
509
531
YQCQICNRAFTQNGNLTAHMKLH
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sakowv30014667m.g
Saccoglossus kowalevskii
Sakowv30014667m.g
N
0.823