CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30044479m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30044479m.g
T142503_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23938918_peptide
C2H2 ZF
262
284
YACQQCEKKFPDKWHLERHKNVH
23938918_peptide
C2H2 ZF
315
337
IKCQHCEKLFRDKWHLERHERSH
23938918_peptide
C2H2 ZF
343
365
YICDECGKMFSSQSHYREHKIRH
23938918_peptide
C2H2 ZF
371
394
FICDKCGRGFNFAPDLRDHEDRVH
23938918_peptide
C2H2 ZF
457
479
FICAICNTGLQTSPGLKGHLKSH
23938918_peptide
C2H2 ZF
486
508
FHCDQCGKIYQSLLGLKWHQAVH
23938918_peptide
C2H2 ZF
513
535
ICCEQCDCKFYRKIDLKRHSMVH
23938918_peptide
C2H2 ZF
541
563
CVCETCGILFKRLSSLVFHRKKH
23938918_peptide
C2H2 ZF
570
592
YLCELCNKDFNSTAALKRHAVIH
23938918_peptide
C2H2 ZF
598
620
FICDQCNKTFSRKDNLKTHMKVH
23938919_peptide
C2H2 ZF
145
167
YACQQCEKKFPDKWHLERHKNVH
23938919_peptide
C2H2 ZF
198
220
IKCQHCEKLFRDKWHLERHERSH
23938919_peptide
C2H2 ZF
226
248
YICDECGKMFSSQSHYREHKIRH
23938919_peptide
C2H2 ZF
254
277
FICDKCGRGFNFAPDLRDHEDRVH
23938919_peptide
C2H2 ZF
340
362
FICAICNTGLQTSPGLKGHLKSH
23938919_peptide
C2H2 ZF
369
391
FHCDQCGKIYQSLLGLKWHQAVH
23938919_peptide
C2H2 ZF
396
418
ICCEQCDCKFYRKIDLKRHSMVH
23938919_peptide
C2H2 ZF
424
446
CVCETCGILFKRLSSLVFHRKKH
23938919_peptide
C2H2 ZF
453
475
YLCELCNKDFNSTAALKRHAVIH
23938919_peptide
C2H2 ZF
481
503
FICDQCNKTFSRKDNLKTHMKVH
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action