Aquca_027_00051 (Aquilegia coerulea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Aquca_027_00051 T142549_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
JKD
M06818_2.00
Arabidopsis thaliana
HHNWWTTTTGTCKTTTWBYD

HRVWAAAMGACAAAAWWNDD
Dap-seq
OMalley et al.(2016)
JKD_col_a
0.827 0.977
IDD7
M06803_2.00
Arabidopsis thaliana
NDDTTTTGTCKTTTWBYD

HRVWAAAMGACAAAAHHN
Dap-seq
OMalley et al.(2016)
IDD7_col_a
0.797 0.953
IDD4
M06809_2.00
Arabidopsis thaliana
WWTTTTGTCKTTTWSYD

HRSWAAAMGACAAAAWW
Dap-seq
OMalley et al.(2016)
IDD4_col_a
0.797 0.907
MGP
M06795_2.00
Arabidopsis thaliana
HNHDWTTTTGTCKTTTWNYD

HRNWAAAMGACAAAAWHDND
Dap-seq
OMalley et al.(2016)
MGP_col_a
0.797 0.907
MGP
M06796_2.00
Arabidopsis thaliana
NNDTTTTGTCKTTTWBYD

HRVWAAAMGACAAAAHNN
Dap-seq
OMalley et al.(2016)
MGP_colamp_a
0.797 0.907
IDD5
M06807_2.00
Arabidopsis thaliana
DNTTTTGTCKTTTTSYD

HRSAAAAMGACAAAANH
Dap-seq
OMalley et al.(2016)
IDD5_colamp_a
0.792 0.930
IDD5
M06808_2.00
Arabidopsis thaliana
WTTTTGTCKTTTWSYD

HRSWAAAMGACAAAAW
Dap-seq
OMalley et al.(2016)
IDD5_col
0.792 0.930
AT1G14580
M06797_2.00
Arabidopsis thaliana
NNNWWTTTTGTCKTTTWSYD

HRSWAAAMGACAAAAWWNNN
Dap-seq
OMalley et al.(2016)
At1g14580_col_a
0.792 0.884
AT1G14580
M06798_2.00
Arabidopsis thaliana
NNTTTTGTCKTTTWSYD

HRSWAAAMGACAAAANN
Dap-seq
OMalley et al.(2016)
At1g14580_colamp_a
0.792 0.884
NUC
M06822_2.00
Arabidopsis thaliana
NNNNNTTTTGTCKTYTWBYD

HRVWARAMGACAAAANNNNN
Dap-seq
OMalley et al.(2016)
NUC_col_a
0.774 0.884
NUC
M06823_2.00
Arabidopsis thaliana
NDTTTTGTCGTYTWNYD

HRNWARACGACAAAAHN
Dap-seq
OMalley et al.(2016)
NUC_colamp_a
0.774 0.884
IDD1
M06824_2.00
Arabidopsis thaliana
DNTTTTGTCKTTTWBYD

HRVWAAAMGACAAAANH
Dap-seq
OMalley et al.(2016)
At5g66730_colamp_a
0.764 0.930
IDD1
M06825_2.00
Arabidopsis thaliana
WDTTTTGTCKTTTWNYD

HRNWAAAMGACAAAAHW
Dap-seq
OMalley et al.(2016)
At5g66730_col
0.764 0.930
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_027_00051.1 C2H2 ZF 169 190
Aquca_027_00051.1 C2H2 ZF 189 215
Aquca_027_00051.2 C2H2 ZF 143 164
Aquca_027_00051.2 C2H2 ZF 163 189
Aquca_027_00051.3 C2H2 ZF 143 164
Aquca_027_00051.3 C2H2 ZF 163 189

Links

Other C2H2 ZF family TFs
Other Aquilegia coerulea TFs

642 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSONIG00000017476 Oreochromis niloticus ENSONIG00000017476 I 0.000
Cflo_03420--XP_394146.3_APIME Camponotus floridanus Cflo_03420--XP_394146.3_APIME I 0.000
Hsal_03393--XP_394146.3_APIME Harpegnathos saltator Hsal_03393--XP_394146.3_APIME I 0.000
CapteG165634 Capitella teleta CapteG165634 I 0.000
ENSORLG00000005403 Oryzias latipes ENSORLG00000005403 I 0.000
TC001448 Tribolium castaneum TC001448 N 0.000
SPU_014249 Strongylocentrotus purpuratus SPU_014249 N 0.000
SMAR015279 Strigamia maritima SMAR015279 N 0.000
PHUM613040 Pediculus humanus PHUM613040 N 0.000
GG14662 Drosophila erecta FBgn0106918 N 0.000
tetur01g16040 Tetranychus urticae tetur01g16040 N 0.000
Aan_R007988 Calypte anna Aan_R007988 N 0.000
Afo_R000495 Aptenodytes forsteri Afo_R000495 N 0.000
Alligator_sinensis_CCG000862.1 Alligator sinensis Alligator_sinensis_CCG000862.1 N 0.000
Brh_R013374 Buceros rhinoceros Brh_R013374 N 0.000
Cflo_02462--XP_391937.2_APIME Camponotus floridanus Cflo_02462--XP_391937.2_APIME N 0.000
NV13641 Nasonia vitripennis NV13641 N 0.000
NEMVEDRAFT_v1g96877 Nematostella vectensis NEMVEDRAFT_v1g96877 N 0.000
GH15456 Drosophila grimshawi FBgn0122928 N 0.000
GH23748 Drosophila grimshawi FBgn0131205 N 0.000
GI16736 Drosophila mojavensis FBgn0139484 N 0.000
GD25707 Drosophila simulans FBgn0196992 N 0.000
GJ12482 Drosophila virilis FBgn0199724 N 0.000
GK20151 Drosophila willistoni FBgn0222148 N 0.000
GE21022 Drosophila yakuba FBgn0238304 N 0.000
trh Drosophila melanogaster FBgn0262139 N 0.000
GB52114 Apis mellifera GB52114 N 0.000
HelroG63031 Helobdella robusta HelroG63031 N 0.000
ISCW018625 Ixodes scapularis ISCW018625 N 0.000
L798_01241 Zootermopsis nevadensis L798_01241 N 0.000
LotgiG127403 Lottia gigantea LotgiG127403 N 0.000
MCINX015160 Melitaea cinxia MCINX015160 N 0.000
Cmyd_10005570 Chelonia mydas Cmyd_10005570 N 0.000
ENSP00000348460-D1 Bos grunniens ENSP00000348460-D1 N 0.000
ACUA021406 Anopheles culicifacies ACUA021406 N 0.000
ADIR001051 Anopheles dirus ADIR001051 N 0.000
AEPI007278 Anopheles epiroticus AEPI007278 N 0.000
AFAF017713 Anopheles farauti AFAF017713 N 0.000
AFUN004699 Anopheles funestus AFUN004699 N 0.000
AMAM000698 Anopheles maculatus AMAM000698 N 0.000
AMEC022213 Anopheles melas AMEC022213 N 0.000
AMEM001368 Anopheles merus AMEM001368 N 0.000
AMIN002121 Anopheles minimus AMIN002121 N 0.000
AQUA005712 Anopheles quadriannulatus AQUA005712 N 0.000
ASIS013948 Anopheles sinensis ASIS013948 N 0.000
ASTEI06194 Anopheles stephensi ASTEI06194 N 0.000
BGLB001139 Biomphalaria glabrata BGLB001139 N 0.000
ACOM029080 Anopheles coluzzii ACOM029080 N 0.000
AATE003730 Anopheles atroparvus AATE003730 N 0.000
AARA001122 Anopheles arabiensis AARA001122 N 0.000
ENSP00000348460 Macaca fascicularis ENSP00000348460 N 0.000
Gfo_R012966 Geospiza fortis Gfo_R012966 N 0.000
Hsal_10736--XP_391937.2_APIME Harpegnathos saltator Hsal_10736--XP_391937.2_APIME N 0.000
Pvit_04747 Pogona vitticeps Pvit_04747 N 0.000
Tal_R006980 Tyto alba Tal_R006980 N 0.000
gw.84.113.1 Branchiostoma floridae gw.84.113.1 N 0.000
Ocbimv22029779m.g Octopus bimaculoides Ocbimv22029779m.g N 0.000
Sakowv30006415m.g Saccoglossus kowalevskii Sakowv30006415m.g N 0.000
CLEC007310 Cimex lectularius CLEC007310 N 0.000
LCUP010821 Lucilia cuprina LCUP010821 N 0.000
LDEC011477 Leptinotarsa decemlineata LDEC011477 N 0.000
npas3 Xenopus tropicalis XB-GENE-999791 N 0.000
AALB007750 Anopheles albimanus AALB007750 N 0.000
MDOA009035 Musca domestica MDOA009035 N 0.000
GF24890 Drosophila ananassae FBgn0101882 N 0.000
CpipJ_CPIJ006378 Culex pipiens CpipJ_CPIJ006378 N 0.000
Npas3 Dipodomys ordii ENSDORG00000000860 N 0.000
ENSECAG00000004630 Equus caballus ENSECAG00000004630 N 0.000
NPAS3 Erinaceus europaeus ENSEEUG00000006528 N 0.000
NPAS3 Echinops telfairi ENSETEG00000016603 N 0.000
NPAS3 Homo sapiens ENSG00000151322 N 0.000
npas1 Gasterosteus aculeatus ENSGACG00000009494 N 0.000
NPAS3 Gorilla gorilla ENSGGOG00000022941 N 0.000
ENSGMOG00000016149 Gadus morhua ENSGMOG00000016149 N 0.000
ENSLACG00000001145 Latimeria chalumnae ENSLACG00000001145 N 0.000
NPAS3 Loxodonta africana ENSLAFG00000007169 N 0.000
ENSLOCG00000009512 Lepisosteus oculatus ENSLOCG00000009512 N 0.000
ENSLOCG00000014899 Lepisosteus oculatus ENSLOCG00000014899 N 0.000
ENSMEUG00000000606 Macropus eugenii ENSMEUG00000000606 N 0.000
npas1 Danio rerio ENSDARG00000015876 N 0.000
NPAS3 Cavia porcellus ENSCPOG00000006976 N 0.000
AAEL002343 Aedes aegypti AAEL002343 N 0.000
AAEL014740 Aedes aegypti AAEL014740 N 0.000
ACEP14936 Atta cephalotes ACEP14936 N 0.000
ACYPI001635 Acyrthosiphon pisum ACYPI001635 N 0.000
ADAC003908 Anopheles darlingi ADAC003908 N 0.000
AGAP000056 Anopheles gambiae AGAP000056 N 0.000
CGI_10014877 Crassostrea gigas CGI_10014877 N 0.000
CPIJ006378 Culex quinquefasciatus CPIJ006378 N 0.000
ENSAMEG00000018716 Ailuropoda melanoleuca ENSAMEG00000018716 N 0.000
ENSAMXG00000020327 Astyanax mexicanus ENSAMXG00000020327 N 0.000
ENSAPLG00000000714 Anas platyrhynchos ENSAPLG00000000714 N 0.000
NPAS3 Choloepus hoffmanni ENSCHOG00000013756 N 0.000
NPAS3 Callithrix jacchus ENSCJAG00000005437 N 0.000
ENSMEUG00000012966 Macropus eugenii ENSMEUG00000012966 N 0.000
ENSMGAG00000016559 Meleagris gallopavo ENSMGAG00000016559 N 0.000
ENSMICG00000000605 Microcebus murinus ENSMICG00000000605 N 0.000
NPAS3 Pan troglodytes ENSPTRG00000006249 N 0.000
NPAS3 Pteropus vampyrus ENSPVAG00000004849 N 0.000
NPAS3 Sorex araneus ENSSARG00000003164 N 0.000
ENSSHAG00000011475 Sarcophilus harrisii ENSSHAG00000011475 N 0.000
ENSSSCG00000024473 Sus scrofa ENSSSCG00000024473 N 0.000
ENSSTOG00000014736 Ictidomys tridecemlineatus ENSSTOG00000014736 N 0.000
NPAS3 Tupaia belangeri ENSTBEG00000016041 N 0.000
ENSTGUG00000011911 Taeniopygia guttata ENSTGUG00000011911 N 0.000
npas1 Takifugu rubripes ENSTRUG00000012318 N 0.000
NPAS3 Tursiops truncatus ENSTTRG00000003266 N 0.000
NPAS3 Vicugna pacos ENSVPAG00000001108 N 0.000
ENSXMAG00000004213 Xiphophorus maculatus ENSXMAG00000004213 N 0.000
trh Drosophila sechellia FBgn0025046 N 0.000
ENSPSIG00000017052 Pelodiscus sinensis ENSPSIG00000017052 N 0.000
ENSPMAG00000007632 Petromyzon marinus ENSPMAG00000007632 N 0.000
NPAS3 Macaca mulatta ENSMMUG00000014839 N 0.000
NPAS1 Monodelphis domestica ENSMODG00000009053 N 0.000
ENSMODG00000024103 Monodelphis domestica ENSMODG00000024103 N 0.000
ENSMPUG00000001046 Mustela putorius furo ENSMPUG00000001046 N 0.000
Npas3 Mus musculus ENSMUSG00000021010 N 0.000
ENSNLEG00000003239 Nomascus leucogenys ENSNLEG00000003239 N 0.000
ENSOANG00000014043 Ornithorhynchus anatinus ENSOANG00000014043 N 0.000
NPAS3 Otolemur garnettii ENSOGAG00000014886 N 0.000
NPAS3 Ochotona princeps ENSOPRG00000008184 N 0.000
ENSORLG00000006931 Oryzias latipes ENSORLG00000006931 N 0.000
NPAS3 Oryzias latipes ENSORLG00000018065 N 0.000
NPAS3 Procavia capensis ENSPCAG00000007391 N 0.000
ENSPFOG00000008940 Poecilia formosa ENSPFOG00000008940 N 0.000
GA19928 Drosophila pseudoobscura FBgn0079924 N 0.000