CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.25463s0088
(
Boechera stricta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Bostr.25463s0088
T142599_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.25463s0088.1.p
C2H2 ZF
115
138
YFCGVCDRRFYTNEKLINHFKQIH
Links
Other
C2H2 ZF
family TFs
Other
Boechera stricta
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_kg.6__3166__AT4G12240.1
Arabidopsis lyrata
fgenesh2_kg.6__3166__AT4G12240.1
N
0.827
AT4G12240
Arabidopsis thaliana
AT4G12240
N
0.827
TCM_016068
Theobroma cacao
TCM_016068
N
0.817
Eucgr.E00472
Eucalyptus grandis
Eucgr.E00472
N
0.769
VIT_02s0241g00170
Vitis vinifera
VIT_02s0241g00170
N
0.766