CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10001255m.g
(
Citrus clementina
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ciclev10001255m.g
T142756_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10001255m
C2H2 ZF
194
217
CACSQCGEVFPKIESLELHQAVRH
Links
Other
C2H2 ZF
family TFs
Other
Citrus clementina
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10020159m.g
Capsella rubella
Carubv10020159m.g
N
0.768
Eucgr.F01643
Eucalyptus grandis
Eucgr.F01643
N
0.768
fgenesh2_kg.2__1849__AT1G75710.1
Arabidopsis lyrata
fgenesh2_kg.2__1849__AT1G75710.1
N
0.768
Cagra.0799s0042
Capsella grandiflora
Cagra.0799s0042
N
0.768
Bostr.20129s0005
Boechera stricta
Bostr.20129s0005
N
0.768
Carubv10009224m.g
Capsella rubella
Carubv10009224m.g
N
0.758
Cagra.1843s0002
Capsella grandiflora
Cagra.1843s0002
N
0.758
GLYMA14G40450
Glycine max
GLYMA14G40450
N
0.756