CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000181649
(
Malus domestica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
MDP0000181649
T143186_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000181649
C2H2 ZF
19
42
HYCDYCGICRSKKSLIASHILSHH
MDP0000181649
C2H2 ZF
64
84
TCEECGTTFKKPAHLKQHLQN
MDP0000181649
C2H2 ZF
143
167
YICSVDDCHSSYRRKDHLTRHLLQH
MDP0000181649
C2H2 ZF
172
197
FKCPVENCNREFVFQGNIKRHVNELH
MDP0000181649
C2H2 ZF
212
236
HVCQEIGCGKEFRYASRLRKHEESH
Links
Other
C2H2 ZF
family TFs
Other
Malus domestica
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000321222
Malus domestica
MDP0000321222
N
0.823
MDP0000175922
Malus domestica
MDP0000175922
N
0.823
Pm004197
Prunus mume
Pm004197
N
0.789