orange1.1g000392m.g (Citrus sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 orange1.1g000392m.g T143248_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g000392m C2H2 ZF 1466 1489
orange1.1g000392m C2H2 ZF 1490 1513
orange1.1g000392m C2H2 ZF 1519 1543
orange1.1g000392m C2H2 ZF 1549 1575
orange1.1g001121m C2H2 ZF 1035 1058
orange1.1g001121m C2H2 ZF 1059 1082
orange1.1g001121m C2H2 ZF 1088 1112
orange1.1g001121m C2H2 ZF 1118 1144
orange1.1g001158m C2H2 ZF 1020 1043
orange1.1g001158m C2H2 ZF 1044 1067
orange1.1g001158m C2H2 ZF 1073 1097
orange1.1g001158m C2H2 ZF 1103 1129
orange1.1g001193m C2H2 ZF 1012 1035
orange1.1g001193m C2H2 ZF 1036 1059
orange1.1g001193m C2H2 ZF 1065 1089
orange1.1g001193m C2H2 ZF 1095 1121

Links

Other C2H2 ZF family TFs
Other Citrus sinensis TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10030491m.g Citrus clementina Ciclev10030491m.g N 0.827