Pavir.Fb01832 (Panicum virgatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pavir.Fb01832 T143356_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fb01832.1.p C2H2 ZF 79 100

Links

Other C2H2 ZF family TFs
Other Panicum virgatum TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si004657m.g Setaria italica Si004657m.g N 0.827
Si015086m.g Setaria italica Si015086m.g N 0.827
GRMZM2G132057 Zea mays GRMZM2G132057 N 0.827
GSMUA_AchrUn_randomG02240_001 Musa acuminata GSMUA_AchrUn_randomG02240_001 N 0.827
Pavir.Fa00593 Panicum virgatum Pavir.Fa00593 N 0.827
Traes_1AL_7A2072713 Triticum aestivum Traes_1AL_7A2072713 N 0.827
Sb07g028870 Sorghum bicolor Sb07g028870 N 0.817
GRMZM2G459540 Zea mays GRMZM2G459540 N 0.817