Pavir.Hb01707 (Panicum virgatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pavir.Hb01707 T143373_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Hb01707.1.p C2H2 ZF 206 229

Links

Other C2H2 ZF family TFs
Other Panicum virgatum TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MLOC_64234 Hordeum vulgare MLOC_64234 N 0.817
GRMZM2G028046 Zea mays GRMZM2G028046 N 0.807
Sb05g004260 Sorghum bicolor Sb05g004260 N 0.807
Si026443m.g Setaria italica Si026443m.g N 0.797
Traes_4DS_A0186B942 Triticum aestivum Traes_4DS_A0186B942 N 0.797
Traes_2BL_41168D652 Triticum aestivum Traes_2BL_41168D652 N 0.772
MLOC_64556 Hordeum vulgare MLOC_64556 N 0.772
Cla021143 Citrullus lanatus Cla021143 N 0.766