CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0277s0070
(
Salix purpurea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SapurV1A.0277s0070
T143475_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0277s0070.1.p
C2H2 ZF
21
44
YYCDYCGICRSKKSLITSHVLTHH
SapurV1A.0277s0070.1.p
C2H2 ZF
66
87
TCEKCGASFKKPAYLIQHMQSH
SapurV1A.0277s0070.1.p
C2H2 ZF
93
117
FKCSYDDCHASYRRKDHLTRHLLQH
SapurV1A.0277s0070.1.p
C2H2 ZF
122
147
FNCQNENCNREFVYPSNLKRHVRELH
SapurV1A.0277s0070.1.p
C2H2 ZF
162
186
YVCQEPGCGKAFGYPSKLRKHEDSH
SapurV1A.0277s0070.1.p
C2H2 ZF
195
219
MCLEPGCMKHFSNKECLKAHIQSCH
SapurV1A.0277s0070.1.p
C2H2 ZF
253
278
IKCHFKDCQHTFSTKTNLNQHVKAVH
Links
Other
C2H2 ZF
family TFs
Other
Salix purpurea
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0013s11300
Populus trichocarpa
POPTR_0013s11300
N
0.815