CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0391s0180
(
Salix purpurea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SapurV1A.0391s0180
T143483_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0391s0180.1.p
C2H2 ZF
23
46
YYCDYCGICRSKKSLITSHVLTHH
SapurV1A.0391s0180.1.p
C2H2 ZF
68
89
TCEKCGASFKKPAYLVQHMQSH
SapurV1A.0391s0180.1.p
C2H2 ZF
95
119
FRCSVDDCHASYRRKDHLTRHLFHH
SapurV1A.0391s0180.1.p
C2H2 ZF
124
149
FKCELENCDRKFVYPSNLKRHVRELH
SapurV1A.0391s0180.1.p
C2H2 ZF
164
188
YVCQELGCGKAFRYPSKLQKHVDSH
SapurV1A.0391s0180.1.p
C2H2 ZF
197
221
MCLEPGCMKHFSNKKCLKAHIQSCH
SapurV1A.0391s0180.1.p
C2H2 ZF
255
280
IKCHFKGCQHTFSTKTNLNQHVKAVH
SapurV1A.0391s0180.1.p
C2H2 ZF
286
312
YECGFPGCGRRFSYKHVRDNHEKSGLH
Links
Other
C2H2 ZF
family TFs
Other
Salix purpurea
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.1408s0040
Salix purpurea
SapurV1A.1408s0040
N
0.825