CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10012447m.g
(
Eutrema salsugineum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Thhalv10012447m.g
T143555_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10012447m
C2H2 ZF
1249
1271
RCYLEGCKMTFKNKADLEAHKRN
Thhalv10012447m
C2H2 ZF
1272
1295
RCTHEGCGKKFRAHKYLVLHQRVH
Thhalv10012447m
C2H2 ZF
1331
1357
YTCKVDGCGLSFRFVSDYSRHRRKSGH
Links
Other
C2H2 ZF
family TFs
Other
Eutrema salsugineum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra009474
Brassica rapa
Bra009474
N
0.777
Bo9g181310
Brassica oleracea
Bo9g181310
N
0.777