B5DE03 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 B5DE03 T143656_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WT1
M00249_2.00
Homo sapiens
NCYCCCCCVNN

NNBGGGGGRGN
PBM
Barrera et al.(2016)
WT1_REF
0.827 1.000
WT1
M08937_2.00
Homo sapiens
YYYCBBYYCCTCCYYCNCBY

RVGNGRRGGAGGRRVVGRRR
Misc
Kulakovskiy et al.(2013)
WT1_HUMAN.H11MO.0.C
0.827 1.000
Wt1
M08968_2.00
Mus musculus
YYYCBBYYCCTCCYYCNCBY

RVGNGRRGGAGGRRVVGRRR
Misc
Kulakovskiy et al.(2013)
WT1_MOUSE.H11MO.0.B
0.827 1.000
Wt1
M10337_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WT1_02
0.827 1.000
WT1
M10290_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WT1_Q4
0.827 1.000
WT1
M10291_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WT1_Q6_01
0.827 1.000
WT1
M10292_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WT1_Q6_02
0.827 1.000
WT1
M10293_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WT1_Q6
0.827 1.000
WT1
M00244_2.00
Homo sapiens
NNNWAMWATATN

NATATWKTWNNN
PBM
Barrera et al.(2016)
WT1_H373Y
0.827 0.989
WT1
M00245_2.00
Homo sapiens
NNNNNNN

NNNNNNN
PBM
Barrera et al.(2016)
WT1_R366C
0.826 0.989
WT1
M00246_2.00
Homo sapiens
NNNNNNN

NNNNNNN
PBM
Barrera et al.(2016)
WT1_R366L
0.826 0.989
WT1
M00247_2.00
Homo sapiens
NWATATDAHNN

NNDTHATATWN
PBM
Barrera et al.(2016)
WT1_R394L
0.826 0.989
WT1
M00248_2.00
Homo sapiens
NNTATTWTATNNN

NNNATAWAATANN
PBM
Barrera et al.(2016)
WT1_R394W
0.826 0.989
WT1
M00243_2.00
Homo sapiens
NNNNNNN

NNNNNNN
PBM
Barrera et al.(2016)
WT1_F392L
0.820 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
B5DE03 C2H2 ZF 290 314
B5DE03 C2H2 ZF 320 344
B5DE03 C2H2 ZF 350 372
B5DE03 C2H2 ZF 378 402

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ciclev10008866m.g Citrus clementina Ciclev10008866m.g N 0.000
Cla015679 Citrullus lanatus Cla015679 N 0.000
Cucsa.358990 Cucumis sativus Cucsa.358990 N 0.000
Eucgr.J02994 Eucalyptus grandis Eucgr.J02994 N 0.000
MDP0000276691 Malus domestica MDP0000276691 N 0.000
mgf024433m Mimulus guttatus mgf024433m N 0.000
orange1.1g019823m.g Citrus sinensis orange1.1g019823m.g N 0.000
PGSC0003DMG400031382 Solanum tuberosum PGSC0003DMG400031382 N 0.000
Pm013502 Prunus mume Pm013502 N 0.000
PRUPE_ppa009556mg Prunus persica PRUPE_ppa009556mg N 0.000
Solyc12g043090.1 Solanum lycopersicum Solyc12g043090.1 N 0.000
VIT_09s0002g04700 Vitis vinifera VIT_09s0002g04700 N 0.000