CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LCUP004607
(
Lucilia cuprina
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
LCUP004607
T144210_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Kr
M03663_2.00
Drosophila melanogaster
BTTAACCCTTTH
DAAAGGGTTAAV
SELEX
Nitta et al.(2015)
Kr_1
0.825
0.991
Kr
M06047_2.00
Drosophila melanogaster
DTWACCCBTT
AAVGGGTWAH
B1H
Zhu et al.(2011)
Kr_FlyReg_FBgn0001325
0.825
0.991
Kr
M06048_2.00
Drosophila melanogaster
TAACCCBTTNV
BNAAVGGGTTA
B1H
Zhu et al.(2011)
Kr_NAR_FBgn0001325
0.825
0.991
Kr
M06049_2.00
Drosophila melanogaster
WACCCYTY
RARGGGTW
B1H
Zhu et al.(2011)
Kr_SANGER_5_FBgn0001325
0.825
0.991
Kr
M08411_2.00
Drosophila melanogaster
NNYAACCCTTTBNN
NNVAAAGGGTTRNN
ChIP-chip
Mathelier et al.(2014)
MA0452.2
0.825
0.991
Kr
M09661_2.00
Drosophila melanogaster
HWACCCKTTBN
NVAAMGGGTWD
Misc
Kulakovskiy et al.(2009)
Kr
0.825
0.991
Kr
M10371_2.00
Drosophila melanogaster
WWAACCCRKT
AMYGGGTTAW
Transfac
Matys et al.(2006)
I$KR_01
0.825
0.991
Kr
M10372_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$KR_Q6
0.825
0.991
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LCUP004607-PA
C2H2 ZF
225
247
FTCKICSRSFGYKHVLQNHERTH
LCUP004607-PA
C2H2 ZF
253
275
FECPECHKRFTRDHHLKTHMRLH
LCUP004607-PA
C2H2 ZF
281
303
YHCSHCDRQFVQVANLRRHLRVH
LCUP004607-PA
C2H2 ZF
309
331
YTCEICDGKFSDSNQLKSHMLVH
LCUP004607-PA
C2H2 ZF
337
358
FECEKCHMKFRRRHHLMNHKCG
Links
Other
C2H2 ZF
family TFs
Other
Lucilia cuprina
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy