CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
LDEC013488
(
Leptinotarsa decemlineata
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
LDEC013488
T144701_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mamo
M06179_2.00
Drosophila melanogaster
YVVGCCTAYHBM
KVDRTAGGCBBR
B1H
Zhu et al.(2011)
CG11071_SANGER_5_FBgn0030532
0.787
0.899
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LDEC013488-PA
C2H2 ZF
54
77
FRCSSCMAAFPSLWLLEQHTALQH
LDEC013488-PA
C2H2 ZF
88
111
FVCEQCGQSYRYRSAYVKHREQNH
LDEC013488-PA
C2H2 ZF
121
143
FSCDVCGMQFRYLKSFKKHRLNH
LDEC013488-PA
C2H2 ZF
269
291
FACPFCGKCVRSKENLKLHVRKH
LDEC013488-PA
C2H2 ZF
297
319
FVCLFCGRAFGGKSDLTRHLRIH
LDEC013488-PA
C2H2 ZF
325
347
YHCDMCGKCFARADYLSKHLTTH
Links
Other
C2H2 ZF
family TFs
Other
Leptinotarsa decemlineata
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
YQE_01325
Dendroctonus ponderosae
YQE_01325
I
0.805
GM17579
Drosophila sechellia
FBgn0172487
I
0.787
GJ19127
Drosophila virilis
FBgn0206272
I
0.787
mamo
Drosophila melanogaster
FBgn0267033
D
0.787
GI21748
Drosophila mojavensis
FBgn0144478
I
0.787
GE16133
Drosophila yakuba
FBgn0233679
I
0.787
GK25088
Drosophila willistoni
FBgn0227047
I
0.787
GH17835
Drosophila grimshawi
FBgn0125304
I
0.787
GA10742
Drosophila pseudoobscura
FBgn0070798
I
0.787
GG19480
Drosophila erecta
FBgn0111683
I
0.787
MDOA000956
Musca domestica
MDOA000956
I
0.784
MDOA006912
Musca domestica
MDOA006912
I
0.784
BGIBMGA012518
Bombyx mori
BGIBMGA012518
I
0.779
KGM_16407
Danaus plexippus
KGM_16407
I
0.779
GF19068
Drosophila ananassae
FBgn0096080
I
0.779
HHAL010202-PA
Halyomorpha halys
HHAL010202-PA
I
0.775
RPRC007615
Rhodnius prolixus
RPRC007615
I
0.771
NV14750
Nasonia vitripennis
NV14750
I
0.769
ACEP26248
Atta cephalotes
ACEP26248
I
0.769
SINV14062
Solenopsis invicta
SINV14062
I
0.769