CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
NCU04848
(
Neurospora crassa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
NCU04848
T144861_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU04848
M01880_2.00
Neurospora crassa
NNCYCCRMNN
NNKYGGRGNN
PBM
Weirauch et al.(2014)
pTH8844
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01880_2.00
C2H2 ZF
34
56
LPCKFCAKRFRRVEHVQRHERTH
M01880_2.00
C2H2 ZF
62
87
FECEWEGCGKRFGRRDLLVRHEKLCH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU04848
C2H2 ZF
34
56
LPCKFCAKRFRRVEHVQRHERTH
NCU04848
C2H2 ZF
62
87
FECEWEGCGKRFGRRDLLVRHEKLCH
Links
Other
C2H2 ZF
family TFs
Other
Neurospora crassa
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy