CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LLOJ000532
(
Lutzomyia longipalpis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
LLOJ000532
T150889_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
peb
M06067_2.00
Drosophila melanogaster
KGATGCT
AGCATCM
B1H
Zhu et al.(2011)
peb-F1-3_SANGER_2.5_FBgn0003053
0.769
0.874
peb
M03582_2.00
Drosophila melanogaster
YGGWCCA
TGGWCCR
SELEX
Ming et al.(2013)
CB1
0.769
0.874
peb
M03583_2.00
Drosophila melanogaster
GGATGCTGYK
MRCAGCATCC
SELEX
Ming et al.(2013)
CB2
0.769
0.874
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LLOJ000532-PA
C2H2 ZF
172
194
YFCPICNSLLDTQHEFTEHIRSH
LLOJ000532-PA
C2H2 ZF
203
225
FTCRICSKVLSSASSLDRHVLVH
LLOJ000532-PA
C2H2 ZF
231
253
FTCKYCHVTFTTNGNMHRHMRTH
LLOJ000532-PA
C2H2 ZF
589
611
FPCKLCTAVFPNLRALKGHNRIH
LLOJ000532-PA
C2H2 ZF
620
642
YRCNMCPYTIHDKAALIRHMRTH
LLOJ000532-PA
C2H2 ZF
648
671
YECAMCNYAFTTKANCERHLRNRH
LLOJ000532-PA
C2H2 ZF
1498
1519
ICAFCMRRFWSTEDLRRHMRTH
LLOJ000532-PA
C2H2 ZF
1525
1547
FQCDVCQRKFTLKHSMLRHQKKH
Links
Other
C2H2 ZF
family TFs
Other
Lutzomyia longipalpis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy