CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LLOJ002369
(
Lutzomyia longipalpis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
LLOJ002369
T150935_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CG12769
M03687_2.00
Drosophila melanogaster
TCCCDCRGGA
TCCYGHGGGA
SELEX
Nitta et al.(2015)
CG12769_1
0.789
0.955
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LLOJ002369-PA
C2H2 ZF
113
135
FECDVCNMKFSNGANMRRHKMRH
LLOJ002369-PA
C2H2 ZF
141
163
YECRVCQKRFFRKDHLAEHFTTH
LLOJ002369-PA
C2H2 ZF
169
192
YHCPICNRGFQRQIAMRAHFQNEH
LLOJ002369-PA
C2H2 ZF
504
523
LQCLFCGIEFPDQTLYFLHK
LLOJ002369-PA
C2H2 ZF
532
556
WKCNICGEQCNNVYEFNSHLLSKSH
Links
Other
C2H2 ZF
family TFs
Other
Lutzomyia longipalpis
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy