CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DICVIV_09031
(
Dictyocaulus viviparus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
DICVIV_09031
T153034_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sptf-3
M00632_2.00
Caenorhabditis elegans
NNMCGCCCMY
RKGGGCGKNN
PBM
Narasimhan et al.(2015)
pTH9394
0.804
0.913
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
DICVIV_09031
C2H2 ZF
252
274
HICHICQKTYGKTSHLRAHLRGH
DICVIV_09031
C2H2 ZF
280
304
FACDWQHCTKRFTRSDELQRHRRTH
DICVIV_09031
C2H2 ZF
310
332
FTCGHCGKKFMRSDHLTKHERTH
Links
Other
C2H2 ZF
family TFs
Other
Dictyocaulus viviparus
TFs
72 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy