CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI00972500
(
Haemonchus contortus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
HCOI00972500
T153830_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mnm-2
M00616_2.00
Caenorhabditis elegans
RCNBWTCNNN
NNNGAWVNGY
PBM
Narasimhan et al.(2015)
pTH9080
0.794
0.884
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI00972500.t1
C2H2 ZF
161
183
HRCDVCYKTFSRSNTLITHKRIH
HCOI00972500.t1
C2H2 ZF
189
211
FNCDHCGRAFRQPGNLTRHRLTH
HCOI00972500.t1
C2H2 ZF
217
239
YVCVQCEKAFNRASNLHTHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Haemonchus contortus
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy