CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HNAJ_0000523901
(
Hymenolepis nana
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
HNAJ_0000523901
T154130_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CG42741
M06169_2.00
Drosophila melanogaster
RCCACRCCCWHY
RDWGGGYGTGGY
B1H
Zhu et al.(2011)
CG9895_SANGER_10_FBgn0034810
0.757
0.710
CG42741
M06170_2.00
Drosophila melanogaster
VRCCACRCCCH
DGGGYGTGGYB
B1H
Zhu et al.(2011)
CG9895_SOLEXA_5_FBgn0034810
0.757
0.710
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HNAJ_0000523901-mRNA-1
C2H2 ZF
523
547
HTCPYPGCPKRYSKSSHLKAHVRTH
HNAJ_0000523901-mRNA-1
C2H2 ZF
553
577
YVCNFRDCTWKFARSDELTRHKRKH
HNAJ_0000523901-mRNA-1
C2H2 ZF
583
605
FGCETCNRRFTRSDHLQLHKRTH
Links
Other
C2H2 ZF
family TFs
Other
Hymenolepis nana
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy