CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nDi.2.2.2.g10740
(
Dirofilaria immitis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nDi.2.2.2.g10740
T155214_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Blimp-1
M03692_2.00
Drosophila melanogaster
NNYACTTTCVYYN
NRRBGAAAGTRNN
SELEX
Nitta et al.(2015)
Blimp-1_1
0.762
0.825
Blimp-1
M06141_2.00
Drosophila melanogaster
ACTTTCACTTTY
RAAAGTGAAAGT
B1H
Zhu et al.(2011)
Blimp-1_NAR_FBgn0035625
0.762
0.825
Blimp-1
M06142_2.00
Drosophila melanogaster
RCTTTCMCTTTY
RAAAGKGAAAGY
B1H
Zhu et al.(2011)
Blimp-1_SANGER_5_FBgn0035625
0.762
0.825
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nDi.2.2.2.t10740
C2H2 ZF
9
31
YECKECSKTFGQLSNLKVHLRTH
nDi.2.2.2.t10740
C2H2 ZF
37
59
FKCSICFKEFTQLAHLQKHHLVH
nDi.2.2.2.t10740
C2H2 ZF
65
87
HQCEVCQKRFSSMSNLKTHLRLH
nDi.2.2.2.t10740
C2H2 ZF
93
115
YPCDLCNAKFTQFVHLKLHKRLH
nDi.2.2.2.t10740
C2H2 ZF
121
142
YNCSCCGKKYISPSGLRTHWKS
Links
Other
C2H2 ZF
family TFs
Other
Dirofilaria immitis
TFs
71 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy