nLs.2.1.2.g05842 (Litomosoides sigmodontis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 nLs.2.1.2.g05842 T155339_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lsy-2
M00615_2.00 		Caenorhabditis elegans
NTACMGTANN
NNTACKGTAN		 PBM
Narasimhan et al.(2015)
pTH10810 		0.781 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t05842-RA C2H2 ZF 65 87
nLs.2.1.2.t05842-RA C2H2 ZF 93 115
nLs.2.1.2.t05842-RA C2H2 ZF 121 143

Links

Other C2H2 ZF family TFs
Other Litomosoides sigmodontis TFs

Invalid Input OrderBy

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action