CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nOo.2.0.1.g05540
(
Onchocerca ochengi
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nOo.2.0.1.g05540
T155398_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nOo.2.0.1.t05540-RA
C2H2 ZF
867
889
YVCGRCGIRCKKPSMLKKHIKSH
nOo.2.0.1.t05540-RA
C2H2 ZF
895
919
YGCKQCNFNFKTKGNLTKHLQSKTH
nOo.2.0.1.t05540-RA
C2H2 ZF
1108
1130
MICDICKRIFRSSTEMTLHRKIH
nOo.2.0.1.t05540-RA
C2H2 ZF
1142
1165
YQCSECKYSVRSRNALQRHMEERH
nOo.2.0.1.t05540-RA
C2H2 ZF
1196
1220
FMCTDCNIGFRKHGILAKHLRSKTH
Links
Other
C2H2 ZF
family TFs
Other
Onchocerca ochengi
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nOo.2.0.1.g05935
Onchocerca ochengi
nOo.2.0.1.g05935
N
0.827
nOo.2.0.1.g05200
Onchocerca ochengi
nOo.2.0.1.g05200
N
0.827
nAv.1.0.1.g07408
Acanthocheilonema viteae
nAv.1.0.1.g07408
N
0.820