CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SSLN_0001917701
(
Schistocephalus solidus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SSLN_0001917701
T157294_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CG42741
M06169_2.00
Drosophila melanogaster
RCCACRCCCWHY
RDWGGGYGTGGY
B1H
Zhu et al.(2011)
CG9895_SANGER_10_FBgn0034810
0.760
0.710
CG42741
M06170_2.00
Drosophila melanogaster
VRCCACRCCCH
DGGGYGTGGYB
B1H
Zhu et al.(2011)
CG9895_SOLEXA_5_FBgn0034810
0.760
0.710
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SSLN_0001917701-mRNA-1
C2H2 ZF
476
500
HKCTFPGCVKSYSKSSHLKAHYRKH
SSLN_0001917701-mRNA-1
C2H2 ZF
506
530
YICTWAECSWRFARSDELTRHKRKH
SSLN_0001917701-mRNA-1
C2H2 ZF
536
558
YTCDQCQKSFTRSDHLSLHRKKH
Links
Other
C2H2 ZF
family TFs
Other
Schistocephalus solidus
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DILT_0000895101
Diphyllobothrium latum
DILT_0000895101
I
0.808
ACUA022835
Anopheles culicifacies
ACUA022835
I
0.767
ADIR011723
Anopheles dirus
ADIR011723
I
0.767
AFAF003290
Anopheles farauti
AFAF003290
I
0.767
AFUN011554
Anopheles funestus
AFUN011554
I
0.767
ACOM041708
Anopheles coluzzii
ACOM041708
I
0.767
ACHR001612
Anopheles christyi
ACHR001612
I
0.767
AARA000098
Anopheles arabiensis
AARA000098
I
0.767
NEMVEDRAFT_v1g83807
Nematostella vectensis
NEMVEDRAFT_v1g83807
I
0.767
NEMVEDRAFT_v1g147359
Nematostella vectensis
NEMVEDRAFT_v1g147359
I
0.767
CpipJ_CPIJ004724
Culex pipiens
CpipJ_CPIJ004724
I
0.767
AATE020384
Anopheles atroparvus
AATE020384
I
0.767
AMEM014876
Anopheles merus
AMEM014876
I
0.767
AQUA001297
Anopheles quadriannulatus
AQUA001297
I
0.767
CPIJ004724
Culex quinquefasciatus
CPIJ004724
I
0.767
AGAP010520
Anopheles gambiae
AGAP010520
I
0.767
ADAC003701
Anopheles darlingi
ADAC003701
I
0.767
AAEL004806
Aedes aegypti
AAEL004806
I
0.767
DAPPUDRAFT_27999
Daphnia pulex
DAPPUDRAFT_27999
I
0.767
klf2
Ciona intestinalis
ENSCING00000014590
I
0.767
ASTEI07110
Anopheles stephensi
ASTEI07110
I
0.767
BGLB001194
Biomphalaria glabrata
BGLB001194
I
0.767
AMIN001268
Anopheles minimus
AMIN001268
I
0.767
ENSCSAVG00000009966
Ciona savignyi
ENSCSAVG00000009966
I
0.767
AALB010205
Anopheles albimanus
AALB010205
I
0.767
scaffold1313-EXSNAP2012.6
Pristionchus exspectatus
scaffold1313-EXSNAP2012.6
I
0.764
ML25776a
Mnemiopsis leidyi
ML25776a
I
0.764
tetur01g01330
Tetranychus urticae
tetur01g01330
I
0.764
NEMVEDRAFT_v1g229565
Nematostella vectensis
NEMVEDRAFT_v1g229565
I
0.764
GG20076
Drosophila erecta
FBgn0112270
I
0.760
GH20915
Drosophila grimshawi
FBgn0128377
I
0.760
GI18350
Drosophila mojavensis
FBgn0141089
I
0.760
GF11307
Drosophila ananassae
FBgn0088347
I
0.760
GA22108
Drosophila pseudoobscura
FBgn0064422
I
0.760
BGIBMGA011419
Bombyx mori
BGIBMGA011419
I
0.760
GL10855
Drosophila persimilis
FBgn0148465
I
0.760
MDOA005423
Musca domestica
MDOA005423
I
0.760
GD25089
Drosophila simulans
FBgn0196401
I
0.760
CG42741
Drosophila melanogaster
FBgn0261705
D
0.760
MCINX007305
Melitaea cinxia
MCINX007305
I
0.760
GE11614
Drosophila yakuba
FBgn0229413
I
0.760
GK19604
Drosophila willistoni
FBgn0221602
I
0.760
LCUP006184
Lucilia cuprina
LCUP006184
I
0.760
GJ20749
Drosophila virilis
FBgn0207886
I
0.760
GM15591
Drosophila sechellia
FBgn0170509
I
0.760