CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TMUE_s0001001400
(
Trichuris muris
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
TMUE_s0001001400
T157877_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TMUE_s0001001400
C2H2 ZF
173
195
HRCVYCGKLYSRKYGLKIHLRTH
TMUE_s0001001400
C2H2 ZF
201
223
LRCKVCHRAFGDPSNLNKHTRLH
TMUE_s0001001400
C2H2 ZF
234
256
KCPMCDKTLMRKRDLNRHIASRH
Links
Other
C2H2 ZF
family TFs
Other
Trichuris muris
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TTRE_0000285701
Trichuris trichiura
TTRE_0000285701
N
0.823
D918_09720
Trichuris suis
D918_09720
N
0.823
TTRE_0000191201
Trichuris trichiura
TTRE_0000191201
N
0.799
D917_09026
Trichinella nativa
D917_09026
N
0.783
EFV59777
Trichinella spiralis
EFV59777
N
0.783
TMUE_s0005011900
Trichuris muris
TMUE_s0005011900
N
0.777
D917_02831
Trichinella nativa
D917_02831
N
0.767
SBAD_0001206001
Soboliphyme baturini
SBAD_0001206001
N
0.757