CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_06454
(
Verticillium albo atrum
)
C2H2 ZF,Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00172 (Zn_clus)
IPR007087
IPR001138
VDBG_06454
T158283_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_06454T0
C2H2 ZF
3
25
FECSVCGKEYQRNTHLRRHESTH
VDBG_06454T0
C2H2 ZF
31
51
FSCPYCTKAFARRDVCRKHAT
VDBG_06454T0
Zinc cluster
77
115
RACDACAHSKLACDLAEPCGRCVSRHSICSYNKVQRDPS
Links
Other
C2H2 ZF,Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_06454
Verticillium alfalfae
VDBG_06454
N
1.000