CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RHTO_06094
(
Rhodosporidium toruloides
)
C2H2 ZF,Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00172 (Zn_clus)
IPR007087
IPR001138
RHTO_06094
T158695_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMS24090
C2H2 ZF
16
40
HACPHPGCTASYARIEHMERHAKSH
EMS24090
C2H2 ZF
46
68
YSCQECGKSFARSDVLRRHLKIH
EMS24090
Zinc cluster
94
132
RACRACAIAKIKCSGHAPCQRCSELNKECEYEATASSRP
Links
Other
C2H2 ZF,Zinc cluster
family TFs
Other
Rhodosporidium toruloides
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RHTO_06111
Rhodosporidium toruloides
RHTO_06111
N
0.916