CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VHEMI04212
(
Torrubiella hemipterigena
)
C2H2 ZF,Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00172 (Zn_clus)
IPR007087
IPR001138
VHEMI04212
T158764_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02173
M01893_2.00
Neurospora crassa
NNRKTSSGGVNN
NNBCCSSAMYNN
PBM
Weirauch et al.(2014)
pTH9665
0.738
0.738
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CEJ86805
C2H2 ZF
95
117
HVCPICQRVYERADHLSRHLRSH
CEJ86805
C2H2 ZF
123
145
YECTRCPKRFNRADLLSRHEATH
CEJ86805
Zinc cluster
165
202
EACHNCAASKAKCDDVKPCSRCVSKDIVCESTSRRAEP
Links
Other
C2H2 ZF,Zinc cluster
family TFs
Other
Torrubiella hemipterigena
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy