POPTR_0006s14740 (Populus trichocarpa)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02045 (CBFB_NFYA) IPR001289 POPTR_0006s14740 T160336_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s14740.1 CBF/NF-Y 184 239

Links

Other CBF/NF-Y family TFs
Other Populus trichocarpa TFs

531 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
27647.m000179 Ricinus communis 27647.m000179 I 0.000
29889.m003245 Ricinus communis 29889.m003245 I 0.000
AMTR_s00176p00045260 Amborella trichopoda AMTR_s00176p00045260 I 0.000
Aquca_003_00615 Aquilegia coerulea Aquca_003_00615 I 0.000
Aquca_016_00168 Aquilegia coerulea Aquca_016_00168 I 0.000
Aquca_091_00086 Aquilegia coerulea Aquca_091_00086 I 0.000
ARR14 Arabidopsis thaliana AT2G01760 D 0.000
RR23 Oryza indica BGIOSGA005436 I 0.000
RR21 Oryza indica BGIOSGA012149 I 0.000
RR22 Oryza indica BGIOSGA022430 I 0.000
Bostr.0556s0002 Boechera stricta Bostr.0556s0002 I 0.000
BRADI1G69480 Brachypodium distachyon BRADI1G69480 I 0.000
Cagra.2235s0034 Capsella grandiflora Cagra.2235s0034 I 0.000
Carubv10018465m.g Capsella rubella Carubv10018465m.g I 0.000
cassava40494.m1 Manihot esculenta cassava40494.m1 I 0.000
cassava43032.valid.m1 Manihot esculenta cassava43032.valid.m1 I 0.000
cassava8114.valid.m1 Manihot esculenta cassava8114.valid.m1 I 0.000
Ca_02989 Cicer arietinum Ca_02989 I 0.000
CHLREDRAFT_113139 Chlamydomonas reinhardtii CHLREDRAFT_113139 I 0.000
Ciclev10004470m.g Citrus clementina Ciclev10004470m.g I 0.000
Ciclev10004989m.g Citrus clementina Ciclev10004989m.g I 0.000
Ciclev10007639m.g Citrus clementina Ciclev10007639m.g I 0.000
Ciclev10014527m.g Citrus clementina Ciclev10014527m.g I 0.000
Cla009424 Citrullus lanatus Cla009424 I 0.000
Cla021325 Citrullus lanatus Cla021325 I 0.000
Cla022101 Citrullus lanatus Cla022101 I 0.000
Cucsa.069440 Cucumis sativus Cucsa.069440 I 0.000
Cucsa.252760 Cucumis sativus Cucsa.252760 I 0.000
Cucsa.271670 Cucumis sativus Cucsa.271670 I 0.000
estExt_fgenesh1_pg.C_Chr_16.00010090 Ostreococcus tauri estExt_fgenesh1_pg.C_Chr_16.00010090 D 0.000
estExt_fgenesh2_pg.C_Chr_100175 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_100175 I 0.000
Eucgr.A00189 Eucalyptus grandis Eucgr.A00189 I 0.000
Eucgr.G02094 Eucalyptus grandis Eucgr.G02094 I 0.000
EuGene.0000130210 Micromonas pusilla EuGene.0000130210 I 0.000
evm.TU.supercontig_2.186 Carica papaya evm.TU.supercontig_2.186 I 0.000
evm.TU.supercontig_9.105 Carica papaya evm.TU.supercontig_9.105 I 0.000
e_gw1.1.548.1 Coccomyxa subellipsoidea C169 e_gw1.1.548.1 I 0.000
e_gw1.1.649.1 Ostreococcus RCC809 e_gw1.1.649.1 I 0.000
e_gw1.10.288.1 Physcomitrella patens e_gw1.10.288.1 I 0.000
e_gw1.362.4.1 Physcomitrella patens e_gw1.362.4.1 D 0.000
e_gw1.83.144.1 Volvox carteri e_gw1.83.144.1 I 0.000
F775_14758 Aegilops tauschii F775_14758 I 0.000
F775_19079 Aegilops tauschii F775_19079 I 0.000
F775_32153 Aegilops tauschii F775_32153 I 0.000
gene05178-v1.0-hybrid Fragaria vesca gene05178-v1.0-hybrid I 0.000
GLYMA04G06650 Glycine max GLYMA04G06650 I 0.000
GLYMA06G06730 Glycine max GLYMA06G06730 I 0.000
GLYMA07G37220 Glycine max GLYMA07G37220 I 0.000
GLYMA09G04470 Glycine max GLYMA09G04470 I 0.000
GLYMA14G13320 Glycine max GLYMA14G13320 I 0.000
GLYMA15G15520 Glycine max GLYMA15G15520 I 0.000
GLYMA17G03380 Glycine max GLYMA17G03380 I 0.000
Gorai.002G029200 Gossypium raimondii Gorai.002G029200 I 0.000
Gorai.005G156900 Gossypium raimondii Gorai.005G156900 I 0.000
Gorai.006G259700 Gossypium raimondii Gorai.006G259700 I 0.000
Gorai.011G196400 Gossypium raimondii Gorai.011G196400 I 0.000
GRMZM2G099797 Zea mays GRMZM2G099797 I 0.000
GRMZM2G126834 Zea mays GRMZM2G126834 I 0.000
GRMZM2G409974 Zea mays GRMZM2G409974 I 0.000
GRMZM2G479110 Zea mays GRMZM2G479110 I 0.000
GSMUA_Achr11G05340_001 Musa acuminata GSMUA_Achr11G05340_001 I 0.000
GSMUA_Achr1G22230_001 Musa acuminata GSMUA_Achr1G22230_001 I 0.000
GSMUA_Achr8G30850_001 Musa acuminata GSMUA_Achr8G30850_001 I 0.000
LPERR03G08040 Leersia perrieri LPERR03G08040 I 0.000
LPERR06G04900 Leersia perrieri LPERR06G04900 I 0.000
MDP0000224740 Malus domestica MDP0000224740 I 0.000
MDP0000290818 Malus domestica MDP0000290818 I 0.000
mgf001591m Mimulus guttatus mgf001591m I 0.000
mgf010113m Mimulus guttatus mgf010113m I 0.000
mgf012203m Mimulus guttatus mgf012203m I 0.000
mgf014863m Mimulus guttatus mgf014863m I 0.000
MLOC_11341 Hordeum vulgare MLOC_11341 I 0.000
MLOC_61880 Hordeum vulgare MLOC_61880 I 0.000
MTR_4g121020 Medicago truncatula MTR_4g121020 I 0.000
OB02G42700 Oryza brachyantha OB02G42700 I 0.000
OB03G19140 Oryza brachyantha OB03G19140 I 0.000
OB06G14930 Oryza brachyantha OB06G14930 I 0.000
OBART03G08950 Oryza barthii OBART03G08950 I 0.000
OBART06G05360 Oryza barthii OBART06G05360 I 0.000
OGLUM03G09080 Oryza glumaepatula OGLUM03G09080 I 0.000
OGLUM06G05540 Oryza glumaepatula OGLUM06G05540 I 0.000
OLONG_002370 Oryza longistaminata OLONG_002370 I 0.000
OMERI03G08390 Oryza meridionalis OMERI03G08390 I 0.000
OMERI06G06380 Oryza meridionalis OMERI06G06380 I 0.000
ONIVA06G01160 Oryza nivara ONIVA06G01160 I 0.000
ONIVA06G06160 Oryza nivara ONIVA06G06160 I 0.000
OPUNC03G08640 Oryza punctata OPUNC03G08640 I 0.000
OPUNC06G05150 Oryza punctata OPUNC06G05150 I 0.000
orange1.1g005465m.g Citrus sinensis orange1.1g005465m.g I 0.000
orange1.1g005938m.g Citrus sinensis orange1.1g005938m.g I 0.000
ORGLA02G0311700 Oryza glaberrima ORGLA02G0311700 I 0.000
ORGLA03G0086800 Oryza glaberrima ORGLA03G0086800 I 0.000
ORGLA06G0048800 Oryza glaberrima ORGLA06G0048800 I 0.000
ORUFI03G09090 Oryza rufipogon ORUFI03G09090 I 0.000
ORUFI06G05490 Oryza rufipogon ORUFI06G05490 I 0.000
RR23 Oryza sativa OS02G0796500 I 0.000
RR21 Oryza sativa OS03G0224200 I 0.000
RR22 Oryza sativa OS06G0183100 I 0.000
OSTLU_5500 Ostreococcus lucimarinus OSTLU_5500 I 0.000
Pavir.Da02067 Panicum virgatum Pavir.Da02067 I 0.000
Pavir.Ia00770 Panicum virgatum Pavir.Ia00770 N 0.000
Pavir.Ia04946 Panicum virgatum Pavir.Ia04946 I 0.000
Pavir.Ib00921 Panicum virgatum Pavir.Ib00921 I 0.000
Pavir.J08270 Panicum virgatum Pavir.J08270 I 0.000
Pavir.J35630 Panicum virgatum Pavir.J35630 I 0.000
PDK_20s13009423g003 Phoenix dactylifera PDK_20s13009423g003 I 0.000
PDK_20s1342911g003 Phoenix dactylifera PDK_20s1342911g003 I 0.000
PDK_20s1362511g001 Phoenix dactylifera PDK_20s1362511g001 I 0.000
PDK_20s1451831g001 Phoenix dactylifera PDK_20s1451831g001 I 0.000
PDK_20s1782651g001 Phoenix dactylifera PDK_20s1782651g001 I 0.000
PGSC0003DMG400003196 Solanum tuberosum PGSC0003DMG400003196 I 0.000
PGSC0003DMG400023534 Solanum tuberosum PGSC0003DMG400023534 I 0.000
PGSC0003DMG400029514 Solanum tuberosum PGSC0003DMG400029514 I 0.000
PGSC0003DMG401025624 Solanum tuberosum PGSC0003DMG401025624 I 0.000
PK26059.1 Cannabis sativa PK26059.1 I 0.000
Pm005710 Prunus mume Pm005710 I 0.000
POPTR_0008s13490 Populus trichocarpa POPTR_0008s13490 I 0.000
POPTR_0008s22990 Populus trichocarpa POPTR_0008s22990 I 0.000
POPTR_0010s00320 Populus trichocarpa POPTR_0010s00320 I 0.000
POPTR_0010s11600 Populus trichocarpa POPTR_0010s11600 I 0.000
PRUPE_ppa002408mg Prunus persica PRUPE_ppa002408mg I 0.000
PRUPE_ppa024819mg Prunus persica PRUPE_ppa024819mg I 0.000
SapurV1A.0015s0530 Salix purpurea SapurV1A.0015s0530 I 0.000
SapurV1A.0055s0320 Salix purpurea SapurV1A.0055s0320 I 0.000
SapurV1A.0730s0060 Salix purpurea SapurV1A.0730s0060 I 0.000
SapurV1A.0739s0030 Salix purpurea SapurV1A.0739s0030 I 0.000
Sb01g042400 Sorghum bicolor Sb01g042400 I 0.000
Sb04g035980 Sorghum bicolor Sb04g035980 I 0.000
Sb08g006300 Sorghum bicolor Sb08g006300 N 0.000
Sb10g005580 Sorghum bicolor Sb10g005580 I 0.000
ARR14 Arabidopsis lyrata scaffold_500093.1 I 0.000
SELMODRAFT_115021 Selaginella moellendorffii SELMODRAFT_115021 I 0.000
SELMODRAFT_173793 Selaginella moellendorffii SELMODRAFT_173793 I 0.000
SELMODRAFT_187683 Selaginella moellendorffii SELMODRAFT_187683 I 0.000
SELMODRAFT_418787 Selaginella moellendorffii SELMODRAFT_418787 I 0.000
SELMODRAFT_440049 Selaginella moellendorffii SELMODRAFT_440049 I 0.000
SELMODRAFT_450181 Selaginella moellendorffii SELMODRAFT_450181 I 0.000
Si006013m.g Setaria italica Si006013m.g I 0.000
Si016546m.g Setaria italica Si016546m.g I 0.000
Si034517m.g Setaria italica Si034517m.g I 0.000
Solyc01g065540.2 Solanum lycopersicum Solyc01g065540.2 I 0.000
Solyc04g008050.2 Solanum lycopersicum Solyc04g008050.2 I 0.000
Solyc05g054390.2 Solanum lycopersicum Solyc05g054390.2 I 0.000
Solyc07g005140.2 Solanum lycopersicum Solyc07g005140.2 I 0.000
TCM_011067 Theobroma cacao TCM_011067 I 0.000
TCM_021300 Theobroma cacao TCM_021300 I 0.000
TCM_036926 Theobroma cacao TCM_036926 I 0.000
Thhalv10004402m.g Eutrema salsugineum Thhalv10004402m.g I 0.000
Traes_4AS_6486B493A Triticum aestivum Traes_4AS_6486B493A I 0.000
Traes_4BL_941E7DE4D Triticum aestivum Traes_4BL_941E7DE4D I 0.000
Traes_4DL_2527CA8BF Triticum aestivum Traes_4DL_2527CA8BF I 0.000
Traes_7AS_DECB8080D Triticum aestivum Traes_7AS_DECB8080D I 0.000
Traes_7DS_22DE624A5 Triticum aestivum Traes_7DS_22DE624A5 I 0.000
Traes_7DS_327FBC2CA Triticum aestivum Traes_7DS_327FBC2CA I 0.000
TRIUR3_25342 Triticum urartu TRIUR3_25342 I 0.000
TRIUR3_26858 Triticum urartu TRIUR3_26858 I 0.000
TRIUR3_28229 Triticum urartu TRIUR3_28229 I 0.000
ARR14 Vitis vinifera VIT_01s0011g05830 I 0.000
VIT_04s0008g05900 Vitis vinifera VIT_04s0008g05900 I 0.000
VIT_05s0077g01480 Vitis vinifera VIT_05s0077g01480 I 0.000
VIT_11s0206g00060 Vitis vinifera VIT_11s0206g00060 I 0.000