CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb02g003320
(
Sorghum bicolor
)
CBF/NF-Y
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02045 (CBFB_NFYA)
IPR001289
Sb02g003320
T160379_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb02g003320.1
CBF/NF-Y
68
126
EPVYVNAKQFNGILRRRLARAKAACRDRRVSGGNRRKPYMHESRHLHALRRARGTGGRF
Links
Other
CBF/NF-Y
family TFs
Other
Sorghum bicolor
TFs
131 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000183865
Malus domestica
MDP0000183865
I
0.909
Si032469m.g
Setaria italica
Si032469m.g
N
0.857
GRMZM2G096016
Zea mays
GRMZM2G096016
N
0.839
Pavir.Ba03783
Panicum virgatum
Pavir.Ba03783
N
0.804
Pavir.Bb00319
Panicum virgatum
Pavir.Bb00319
N
0.804
LPERR07G03140
Leersia perrieri
LPERR07G03140
N
0.768
SELMODRAFT_38090
Selaginella moellendorffii
SELMODRAFT_38090
N
0.750
Eucgr.J00764
Eucalyptus grandis
Eucgr.J00764
N
0.750
MTR_3g061510
Medicago truncatula
MTR_3g061510
N
0.750
SELMODRAFT_438143
Selaginella moellendorffii
SELMODRAFT_438143
N
0.750
29864.m001503
Ricinus communis
29864.m001503
N
0.750
OGLUM07G02990
Oryza glumaepatula
OGLUM07G02990
N
0.732
OMERI07G18960
Oryza meridionalis
OMERI07G18960
N
0.732
Gorai.013G251200
Gossypium raimondii
Gorai.013G251200
N
0.732
POPTR_0009s06540
Populus trichocarpa
POPTR_0009s06540
N
0.732
Ca_15574
Cicer arietinum
Ca_15574
I
0.732
AMTR_s00155p00071520
Amborella trichopoda
AMTR_s00155p00071520
N
0.732
Eucgr.A02381
Eucalyptus grandis
Eucgr.A02381
N
0.732
ONIVA07G02150
Oryza nivara
ONIVA07G02150
N
0.732
gene14681-v1.0-hybrid
Fragaria vesca
gene14681-v1.0-hybrid
I
0.732
Aquca_026_00359
Aquilegia coerulea
Aquca_026_00359
N
0.732
POPTR_0001s27300
Populus trichocarpa
POPTR_0001s27300
N
0.732
ORGLA07G0030900
Oryza glaberrima
ORGLA07G0030900
N
0.732
OPUNC07G03530
Oryza punctata
OPUNC07G03530
N
0.732
PRUPE_ppa006634mg
Prunus persica
PRUPE_ppa006634mg
I
0.732
OS07G0158500
Oryza sativa
OS07G0158500
N
0.732
Ca_20250
Cicer arietinum
Ca_20250
N
0.732
SapurV1A.0111s0280
Salix purpurea
SapurV1A.0111s0280
N
0.732
Pavir.J24924
Panicum virgatum
Pavir.J24924
N
0.732
Pavir.Cb00052
Panicum virgatum
Pavir.Cb00052
N
0.732
MLOC_76757
Hordeum vulgare
MLOC_76757
N
0.732
GLYMA08G45030
Glycine max
GLYMA08G45030
I
0.732
cassava29667.valid.m1
Manihot esculenta
cassava29667.valid.m1
I
0.732
LjSGA_007063.1
Lotus japonicus
LjSGA_007063.1
N
0.732
BGIOSGA024793
Oryza indica
BGIOSGA024793
N
0.732
PK21261.1
Cannabis sativa
PK21261.1
I
0.732
cassava2144.valid.m1
Manihot esculenta
cassava2144.valid.m1
I
0.732
GSMUA_Achr4G03600_001
Musa acuminata
GSMUA_Achr4G03600_001
N
0.732
GLYMA18G07890
Glycine max
GLYMA18G07890
I
0.732
cassava36568.valid.m1
Manihot esculenta
cassava36568.valid.m1
I
0.732
MDP0000279028
Malus domestica
MDP0000279028
N
0.732
GSMUA_Achr7G01070_001
Musa acuminata
GSMUA_Achr7G01070_001
N
0.732
Pm012301
Prunus mume
Pm012301
I
0.732
Cucsa.048230
Cucumis sativus
Cucsa.048230
N
0.714
estExt_fgenesh2_pg.C_Chr_130205
Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_130205
N
0.714
cassava38260.valid.m1
Manihot esculenta
cassava38260.valid.m1
I
0.714
estExt_fgenesh1_pg.C_420118
Physcomitrella patens
estExt_fgenesh1_pg.C_420118
N
0.714
cassava31874.valid.m1
Manihot esculenta
cassava31874.valid.m1
N
0.714
Cucsa.127910
Cucumis sativus
Cucsa.127910
I
0.714
cassava31873.valid.m1
Manihot esculenta
cassava31873.valid.m1
N
0.714
Ciclev10015808m.g
Citrus clementina
Ciclev10015808m.g
I
0.714
cassava30668.valid.m1
Manihot esculenta
cassava30668.valid.m1
I
0.714
EuGene.0000150165
Micromonas pusilla
EuGene.0000150165
N
0.714
Ciclev10016491m.g
Citrus clementina
Ciclev10016491m.g
N
0.714
Ciclev10005144m.g
Citrus clementina
Ciclev10005144m.g
I
0.714
Gorai.003G093300
Gossypium raimondii
Gorai.003G093300
I
0.714
orange1.1g017825m.g
Citrus sinensis
orange1.1g017825m.g
I
0.714
Lus10030137.g
Linum usitatissimum
Lus10030137.g
I
0.714
Lus10019708.g
Linum usitatissimum
Lus10019708.g
I
0.714
Lus10016411.g
Linum usitatissimum
Lus10016411.g
I
0.714
orange1.1g019036m.g
Citrus sinensis
orange1.1g019036m.g
I
0.714
orange1.1g026474m.g
Citrus sinensis
orange1.1g026474m.g
N
0.714
PK00926.1
Cannabis sativa
PK00926.1
N
0.714
SapurV1A.2739s0010
Salix purpurea
SapurV1A.2739s0010
N
0.714
SapurV1A.0133s0410
Salix purpurea
SapurV1A.0133s0410
I
0.714
SapurV1A.0027s0420
Salix purpurea
SapurV1A.0027s0420
N
0.714
Lus10009944.g
Linum usitatissimum
Lus10009944.g
I
0.714
Gorai.011G004400
Gossypium raimondii
Gorai.011G004400
N
0.714
gene26819-v1.0-hybrid
Fragaria vesca
gene26819-v1.0-hybrid
N
0.714
evm.TU.supercontig_84.49
Carica papaya
evm.TU.supercontig_84.49
I
0.714
evm.TU.supercontig_20.45
Carica papaya
evm.TU.supercontig_20.45
N
0.714
evm.TU.supercontig_125.6
Carica papaya
evm.TU.supercontig_125.6
I
0.714
gene28941-v1.0-hybrid
Fragaria vesca
gene28941-v1.0-hybrid
N
0.714
Gorai.002G151800
Gossypium raimondii
Gorai.002G151800
I
0.714
Gorai.009G115000
Gossypium raimondii
Gorai.009G115000
N
0.714
Gorai.004G172100
Gossypium raimondii
Gorai.004G172100
I
0.714
Gorai.004G066000
Gossypium raimondii
Gorai.004G066000
I
0.714
cassava24161.valid.m1
Manihot esculenta
cassava24161.valid.m1
N
0.714
Eucgr.K01943
Eucalyptus grandis
Eucgr.K01943
N
0.714
Traes_5DS_443F1993A
Triticum aestivum
Traes_5DS_443F1993A
N
0.714
MTR_8g037270
Medicago truncatula
MTR_8g037270
N
0.714
OB03G37700
Oryza brachyantha
OB03G37700
I
0.714
LPERR12G16030
Leersia perrieri
LPERR12G16030
N
0.714
LPERR03G25340
Leersia perrieri
LPERR03G25340
I
0.714
GSMUA_Achr9G10300_001
Musa acuminata
GSMUA_Achr9G10300_001
N
0.714
OB12G25960
Oryza brachyantha
OB12G25960
N
0.714
OBART03G30600
Oryza barthii
OBART03G30600
I
0.714
OPUNC03G27900
Oryza punctata
OPUNC03G27900
I
0.714
ONIVA03G31950
Oryza nivara
ONIVA03G31950
I
0.714
OMERI03G26770
Oryza meridionalis
OMERI03G26770
I
0.714
OGLUM03G30810
Oryza glumaepatula
OGLUM03G30810
I
0.714
GSMUA_Achr7G07860_001
Musa acuminata
GSMUA_Achr7G07860_001
N
0.714
GSMUA_Achr4G31650_001
Musa acuminata
GSMUA_Achr4G31650_001
N
0.714
GLYMA02G47380
Glycine max
GLYMA02G47380
N
0.714
GLYMA09G02770
Glycine max
GLYMA09G02770
N
0.714
F775_09086
Aegilops tauschii
F775_09086
N
0.714
BRADI1G11800
Brachypodium distachyon
BRADI1G11800
I
0.714
BGIOSGA013378
Oryza indica
BGIOSGA013378
I
0.714
GLYMA10G10240
Glycine max
GLYMA10G10240
N
0.714
GLYMA12G36540
Glycine max
GLYMA12G36540
I
0.714
GSMUA_Achr4G11090_001
Musa acuminata
GSMUA_Achr4G11090_001
I
0.714
GLYMA15G13660
Glycine max
GLYMA15G13660
N
0.714
GLYMA14G01360
Glycine max
GLYMA14G01360
N
0.714
GLYMA13G27230
Glycine max
GLYMA13G27230
I
0.714
30169.m006445
Ricinus communis
30169.m006445
I
0.714
ORGLA03G0280400
Oryza glaberrima
ORGLA03G0280400
I
0.714
Traes_5BS_F1DE20B4B
Triticum aestivum
Traes_5BS_F1DE20B4B
N
0.714
TRIUR3_09920
Triticum urartu
TRIUR3_09920
I
0.714
Traes_5AS_378F353CF
Triticum aestivum
Traes_5AS_378F353CF
N
0.714
Traes_4DS_AFBE29C20
Triticum aestivum
Traes_4DS_AFBE29C20
I
0.714
Traes_4BS_B7B7EFF37
Triticum aestivum
Traes_4BS_B7B7EFF37
I
0.714
TRIUR3_28596
Triticum urartu
TRIUR3_28596
N
0.714
VIT_10s0003g04650
Vitis vinifera
VIT_10s0003g04650
N
0.714
Pm016266
Prunus mume
Pm016266
N
0.714
Cla015490
Citrullus lanatus
Cla015490
I
0.714
Cla009990
Citrullus lanatus
Cla009990
N
0.714
Cla000845
Citrullus lanatus
Cla000845
N
0.714
ORUFI03G31840
Oryza rufipogon
ORUFI03G31840
I
0.714
Traes_4AL_7C4C68FD0
Triticum aestivum
Traes_4AL_7C4C68FD0
I
0.714
POPTR_0006s05210
Populus trichocarpa
POPTR_0006s05210
I
0.714
PGSC0003DMG400011806
Solanum tuberosum
PGSC0003DMG400011806
N
0.714
OS03G0696300
Oryza sativa
OS03G0696300
I
0.714
ORUFI07G03340
Oryza rufipogon
ORUFI07G03340
N
0.714
PRUPE_ppa012173mg
Prunus persica
PRUPE_ppa012173mg
N
0.714
Si022607m.g
Setaria italica
Si022607m.g
N
0.714
TCM_026909
Theobroma cacao
TCM_026909
N
0.714
TCM_024732
Theobroma cacao
TCM_024732
I
0.714
TCM_005875
Theobroma cacao
TCM_005875
I
0.714
TCM_040712
Theobroma cacao
TCM_040712
I
0.714
Solyc01g087240.2
Solanum lycopersicum
Solyc01g087240.2
I
0.714
Bo2g010950
Brassica oleracea
Bo2g010950
N
0.709