CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si024641m.g
(
Setaria italica
)
CBF/NF-Y
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02045 (CBFB_NFYA)
IPR001289
Si024641m.g
T160399_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si024641m
CBF/NF-Y
140
190
HAKQFEGIFHWRRARAKTERVNRLVKARKPYLQESRHLHALCRARGSGGRF
Links
Other
CBF/NF-Y
family TFs
Other
Setaria italica
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Cb00052
Panicum virgatum
Pavir.Cb00052
N
0.824
Si022607m.g
Setaria italica
Si022607m.g
N
0.824
Pavir.J24924
Panicum virgatum
Pavir.J24924
N
0.824
Traes_5DS_443F1993A
Triticum aestivum
Traes_5DS_443F1993A
N
0.784
Traes_5AS_378F353CF
Triticum aestivum
Traes_5AS_378F353CF
N
0.784
LPERR12G16030
Leersia perrieri
LPERR12G16030
N
0.784
Traes_5BS_F1DE20B4B
Triticum aestivum
Traes_5BS_F1DE20B4B
N
0.784
MLOC_76757
Hordeum vulgare
MLOC_76757
N
0.784
TRIUR3_28596
Triticum urartu
TRIUR3_28596
N
0.784
F775_09086
Aegilops tauschii
F775_09086
N
0.784
BRADI4G01380
Brachypodium distachyon
BRADI4G01380
N
0.765
OS12G0618600
Oryza sativa
OS12G0618600
N
0.745
ORUFI12G21270
Oryza rufipogon
ORUFI12G21270
N
0.745
OS03G0647600
Oryza sativa
OS03G0647600
N
0.745
Sb08g021910
Sorghum bicolor
Sb08g021910
N
0.745
Si036465m.g
Setaria italica
Si036465m.g
N
0.745
BGIOSGA010142
Oryza indica
BGIOSGA010142
N
0.745
Pavir.Ia01146
Panicum virgatum
Pavir.Ia01146
N
0.745
Pavir.Ib04124
Panicum virgatum
Pavir.Ib04124
N
0.745
ORUFI03G28690
Oryza rufipogon
ORUFI03G28690
N
0.745
OLONG_002491
Oryza longistaminata
OLONG_002491
N
0.745
OGLUM03G28230
Oryza glumaepatula
OGLUM03G28230
N
0.745
OB12G25960
Oryza brachyantha
OB12G25960
N
0.745
OB03G35340
Oryza brachyantha
OB03G35340
N
0.745
OMERI03G24480
Oryza meridionalis
OMERI03G24480
N
0.745
BRADI1G13680
Brachypodium distachyon
BRADI1G13680
N
0.745
OPUNC03G25190
Oryza punctata
OPUNC03G25190
N
0.745
OMERI12G13600
Oryza meridionalis
OMERI12G13600
N
0.745
ONIVA03G28530
Oryza nivara
ONIVA03G28530
N
0.745
BGIOSGA035818
Oryza indica
BGIOSGA035818
N
0.745
LPERR03G22840
Leersia perrieri
LPERR03G22840
N
0.725
OPUNC12G17240
Oryza punctata
OPUNC12G17240
N
0.725
GSMUA_Achr7G07860_001
Musa acuminata
GSMUA_Achr7G07860_001
N
0.725
Eucgr.C00842
Eucalyptus grandis
Eucgr.C00842
N
0.706
GRMZM2G165488
Zea mays
GRMZM2G165488
N
0.706
Traes_5BL_B5F4BA2FD
Triticum aestivum
Traes_5BL_B5F4BA2FD
N
0.706
Sb01g013430
Sorghum bicolor
Sb01g013430
N
0.706
TCM_037576
Theobroma cacao
TCM_037576
N
0.706
VIT_11s0016g01480
Vitis vinifera
VIT_11s0016g01480
N
0.706
29912.m005288
Ricinus communis
29912.m005288
N
0.706