MDP0000296077 (Malus domestica)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02045 (CBFB_NFYA) IPR001289 MDP0000296077 T160713_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000296077 CBF/NF-Y 390 443

Links

Other CBF/NF-Y family TFs
Other Malus domestica TFs

250 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LjSGA_013150.1 Lotus japonicus LjSGA_013150.1 N 0.970
MDP0000146933 Malus domestica MDP0000146933 N 0.909
Pm012301 Prunus mume Pm012301 I 0.893
PRUPE_ppa006634mg Prunus persica PRUPE_ppa006634mg I 0.893
Eucgr.J00764 Eucalyptus grandis Eucgr.J00764 N 0.889
GLYMA18G07890 Glycine max GLYMA18G07890 I 0.875
Ca_15574 Cicer arietinum Ca_15574 I 0.875
evm.TU.supercontig_84.49 Carica papaya evm.TU.supercontig_84.49 I 0.875
cassava30668.valid.m1 Manihot esculenta cassava30668.valid.m1 I 0.875
GLYMA08G45030 Glycine max GLYMA08G45030 I 0.875
gene14681-v1.0-hybrid Fragaria vesca gene14681-v1.0-hybrid I 0.875
Cucsa.124180 Cucumis sativus Cucsa.124180 N 0.870
Cla008690 Citrullus lanatus Cla008690 N 0.870
MLOC_5869 Hordeum vulgare MLOC_5869 N 0.868
GLYMA02G47380 Glycine max GLYMA02G47380 N 0.857
GLYMA14G01360 Glycine max GLYMA14G01360 N 0.857
Traes_6DL_FD903DBD8 Triticum aestivum Traes_6DL_FD903DBD8 I 0.857
Ciclev10015808m.g Citrus clementina Ciclev10015808m.g I 0.857
MTR_3g061510 Medicago truncatula MTR_3g061510 N 0.857
cassava2144.valid.m1 Manihot esculenta cassava2144.valid.m1 I 0.857
orange1.1g019036m.g Citrus sinensis orange1.1g019036m.g I 0.857
PDK_20s1414531g001 Phoenix dactylifera PDK_20s1414531g001 N 0.853
TRIUR3_09920 Triticum urartu TRIUR3_09920 I 0.852
Traes_4DS_AFBE29C20 Triticum aestivum Traes_4DS_AFBE29C20 I 0.852
Traes_4AL_7C4C68FD0 Triticum aestivum Traes_4AL_7C4C68FD0 I 0.852
mgf012950m Mimulus guttatus mgf012950m I 0.852
VIT_13s0064g00860 Vitis vinifera VIT_13s0064g00860 I 0.852
Solyc01g087240.2 Solanum lycopersicum Solyc01g087240.2 I 0.852
Traes_4BS_B7B7EFF37 Triticum aestivum Traes_4BS_B7B7EFF37 I 0.852
BRADI1G11800 Brachypodium distachyon BRADI1G11800 I 0.852
Bra031242 Brassica rapa Bra031242 I 0.852
Bo5g105110 Brassica oleracea Bo5g105110 I 0.852
Lus10030137.g Linum usitatissimum Lus10030137.g I 0.839
Lus10009944.g Linum usitatissimum Lus10009944.g I 0.839
orange1.1g017825m.g Citrus sinensis orange1.1g017825m.g I 0.839
gene26819-v1.0-hybrid Fragaria vesca gene26819-v1.0-hybrid N 0.839
AMTR_s00103p00144230 Amborella trichopoda AMTR_s00103p00144230 I 0.839
TCM_040712 Theobroma cacao TCM_040712 I 0.839
Ciclev10005144m.g Citrus clementina Ciclev10005144m.g I 0.839
LjSGA_007063.1 Lotus japonicus LjSGA_007063.1 N 0.839
VIT_08s0007g08250 Vitis vinifera VIT_08s0007g08250 I 0.839
30169.m006445 Ricinus communis 30169.m006445 I 0.839
Gorai.004G066000 Gossypium raimondii Gorai.004G066000 I 0.833
Gorai.002G151800 Gossypium raimondii Gorai.002G151800 I 0.821
Gorai.003G093300 Gossypium raimondii Gorai.003G093300 I 0.821
TCM_024732 Theobroma cacao TCM_024732 I 0.821
POPTR_0006s05210 Populus trichocarpa POPTR_0006s05210 I 0.821
cassava36568.valid.m1 Manihot esculenta cassava36568.valid.m1 I 0.821
OB03G37700 Oryza brachyantha OB03G37700 I 0.821
cassava38260.valid.m1 Manihot esculenta cassava38260.valid.m1 I 0.821
PK21261.1 Cannabis sativa PK21261.1 I 0.821
PGSC0003DMG400006863 Solanum tuberosum PGSC0003DMG400006863 I 0.821
Thhalv10021240m.g Eutrema salsugineum Thhalv10021240m.g I 0.821
Eucgr.A02381 Eucalyptus grandis Eucgr.A02381 N 0.815
estExt_fgenesh1_pg.C_420118 Physcomitrella patens estExt_fgenesh1_pg.C_420118 N 0.815
MLOC_52315 Hordeum vulgare MLOC_52315 N 0.806
cassava29667.valid.m1 Manihot esculenta cassava29667.valid.m1 I 0.804
SapurV1A.0133s0410 Salix purpurea SapurV1A.0133s0410 I 0.804
MTR_8g037270 Medicago truncatula MTR_8g037270 N 0.804
PK11147.1 Cannabis sativa PK11147.1 I 0.804
Cagra.10399s0005 Capsella grandiflora Cagra.10399s0005 N 0.804
NF-YA9 Arabidopsis lyrata scaffold_302497.1 N 0.804
evm.TU.supercontig_125.6 Carica papaya evm.TU.supercontig_125.6 I 0.804
Carubv10014289m.g Capsella rubella Carubv10014289m.g N 0.804
Bostr.19424s0556 Boechera stricta Bostr.19424s0556 N 0.804
orange1.1g019764m.g Citrus sinensis orange1.1g019764m.g N 0.804
Ciclev10032207m.g Citrus clementina Ciclev10032207m.g N 0.804
NFYA9 Arabidopsis thaliana AT3G20910 N 0.804
Gorai.013G251200 Gossypium raimondii Gorai.013G251200 N 0.804
GSMUA_Achr4G11090_001 Musa acuminata GSMUA_Achr4G11090_001 I 0.804
Lus10016411.g Linum usitatissimum Lus10016411.g I 0.796
Lus10019708.g Linum usitatissimum Lus10019708.g I 0.796
GSMUA_Achr4G03600_001 Musa acuminata GSMUA_Achr4G03600_001 N 0.796
BRADI4G01820 Brachypodium distachyon BRADI4G01820 N 0.795
OS03G0696300 Oryza sativa OS03G0696300 I 0.786
Solyc01g008490.2 Solanum lycopersicum Solyc01g008490.2 N 0.786
HAP2A Arabidopsis lyrata Al_scaffold_0006_1178 N 0.786
ORUFI03G31840 Oryza rufipogon ORUFI03G31840 I 0.786
Ca_20250 Cicer arietinum Ca_20250 N 0.786
MDP0000279028 Malus domestica MDP0000279028 N 0.786
POPTR_0001s27300 Populus trichocarpa POPTR_0001s27300 N 0.786
Sb01g011220 Sorghum bicolor Sb01g011220 I 0.786
Pavir.Ia00780 Panicum virgatum Pavir.Ia00780 I 0.786
Si037045m.g Setaria italica Si037045m.g I 0.786
VIT_06s0004g02270 Vitis vinifera VIT_06s0004g02270 N 0.786
SapurV1A.2739s0010 Salix purpurea SapurV1A.2739s0010 N 0.786
Cagra.1535s0021 Capsella grandiflora Cagra.1535s0021 N 0.786
GRMZM2G091964 Zea mays GRMZM2G091964 I 0.786
Bostr.2902s0020 Boechera stricta Bostr.2902s0020 N 0.786
Cucsa.127910 Cucumis sativus Cucsa.127910 I 0.786
OBART03G30600 Oryza barthii OBART03G30600 I 0.786
Carubv10001701m.g Capsella rubella Carubv10001701m.g N 0.786
GLYMA13G27230 Glycine max GLYMA13G27230 I 0.786
Gorai.004G172100 Gossypium raimondii Gorai.004G172100 I 0.786
NFYA1 Arabidopsis thaliana AT5G12840 N 0.786
BGIOSGA013378 Oryza indica BGIOSGA013378 I 0.786
Bra001806 Brassica rapa Bra001806 N 0.786
Bra023913 Brassica rapa Bra023913 N 0.786
SapurV1A.0111s0280 Salix purpurea SapurV1A.0111s0280 N 0.786
LPERR03G25340 Leersia perrieri LPERR03G25340 I 0.786
ONIVA03G31950 Oryza nivara ONIVA03G31950 I 0.786
SapurV1A.0027s0420 Salix purpurea SapurV1A.0027s0420 N 0.786
Cla015490 Citrullus lanatus Cla015490 I 0.786
Pavir.J08102 Panicum virgatum Pavir.J08102 I 0.786
ORGLA03G0280400 Oryza glaberrima ORGLA03G0280400 I 0.786
OPUNC03G27900 Oryza punctata OPUNC03G27900 I 0.786
OGLUM03G30810 Oryza glumaepatula OGLUM03G30810 I 0.786
OMERI03G26770 Oryza meridionalis OMERI03G26770 I 0.786
29864.m001503 Ricinus communis 29864.m001503 N 0.786
Bo9g169310 Brassica oleracea Bo9g169310 N 0.782
Bo3g008860 Brassica oleracea Bo3g008860 N 0.782
Bra006165 Brassica rapa Bra006165 N 0.782
GSMUA_Achr7G01070_001 Musa acuminata GSMUA_Achr7G01070_001 N 0.778
30075.m001182 Ricinus communis 30075.m001182 N 0.778
PDK_20s1474561g001 Phoenix dactylifera PDK_20s1474561g001 N 0.769
Lus10011326.g Linum usitatissimum Lus10011326.g I 0.768
Lus10012202.g Linum usitatissimum Lus10012202.g I 0.768
Traes_5BS_49C7C1976 Triticum aestivum Traes_5BS_49C7C1976 N 0.768
Traes_5AS_178725FAF Triticum aestivum Traes_5AS_178725FAF N 0.768
Traes_5DS_5B1AB0AD3 Triticum aestivum Traes_5DS_5B1AB0AD3 N 0.768
Cla006411 Citrullus lanatus Cla006411 N 0.768
Pm016266 Prunus mume Pm016266 N 0.768
TRIUR3_30486 Triticum urartu TRIUR3_30486 N 0.768
POPTR_0009s06540 Populus trichocarpa POPTR_0009s06540 N 0.768
GLYMA12G36540 Glycine max GLYMA12G36540 I 0.768
PRUPE_ppa012173mg Prunus persica PRUPE_ppa012173mg N 0.768
F775_07666 Aegilops tauschii F775_07666 N 0.768
PGSC0003DMG400010697 Solanum tuberosum PGSC0003DMG400010697 N 0.768
GRMZM2G361842 Zea mays GRMZM2G361842 N 0.768
GSMUA_Achr3G29730_001 Musa acuminata GSMUA_Achr3G29730_001 N 0.768
AMTR_s00155p00071520 Amborella trichopoda AMTR_s00155p00071520 N 0.768
TCM_005875 Theobroma cacao TCM_005875 I 0.768
Bo2g010950 Brassica oleracea Bo2g010950 N 0.764
Thhalv10014364m.g Eutrema salsugineum Thhalv10014364m.g N 0.764
Bra008878 Brassica rapa Bra008878 I 0.764
Pm010516 Prunus mume Pm010516 N 0.759
GSMUA_Achr9G10300_001 Musa acuminata GSMUA_Achr9G10300_001 N 0.759
MLOC_76757 Hordeum vulgare MLOC_76757 N 0.759
Aquca_026_00359 Aquilegia coerulea Aquca_026_00359 N 0.759
Bra023378 Brassica rapa Bra023378 N 0.759
PRUPE_ppa011627mg Prunus persica PRUPE_ppa011627mg N 0.759
POPTR_0001s38100 Populus trichocarpa POPTR_0001s38100 N 0.759
PDK_20s1462571g003 Phoenix dactylifera PDK_20s1462571g003 N 0.750
POPTR_0001s26480 Populus trichocarpa POPTR_0001s26480 N 0.750
SapurV1A.0083s0230 Salix purpurea SapurV1A.0083s0230 N 0.750
GRMZM2G104396 Zea mays GRMZM2G104396 N 0.750
Sb08g021370 Sorghum bicolor Sb08g021370 N 0.750
Si023231m.g Setaria italica Si023231m.g N 0.750
GSMUA_Achr4G31650_001 Musa acuminata GSMUA_Achr4G31650_001 N 0.750
SELMODRAFT_38090 Selaginella moellendorffii SELMODRAFT_38090 N 0.750
SELMODRAFT_438143 Selaginella moellendorffii SELMODRAFT_438143 N 0.750
Aquca_014_00766 Aquilegia coerulea Aquca_014_00766 N 0.750
Pavir.Ca02834 Panicum virgatum Pavir.Ca02834 N 0.750
Cucsa.143360 Cucumis sativus Cucsa.143360 N 0.750
Pavir.J06031 Panicum virgatum Pavir.J06031 N 0.750
Eucgr.F03169 Eucalyptus grandis Eucgr.F03169 I 0.741
Lus10023358.g Linum usitatissimum Lus10023358.g N 0.741
mg014677m Mimulus guttatus mg014677m N 0.741
Lus10038448.g Linum usitatissimum Lus10038448.g N 0.741
PGSC0003DMG400008148 Solanum tuberosum PGSC0003DMG400008148 N 0.735
AMTR_s00004p00174960 Amborella trichopoda AMTR_s00004p00174960 N 0.732
Aquca_009_00676 Aquilegia coerulea Aquca_009_00676 N 0.732
GSMUA_Achr7G07860_001 Musa acuminata GSMUA_Achr7G07860_001 N 0.732
Gorai.009G115000 Gossypium raimondii Gorai.009G115000 N 0.732
PDK_20s1414021g001 Phoenix dactylifera PDK_20s1414021g001 N 0.732
evm.TU.supercontig_20.45 Carica papaya evm.TU.supercontig_20.45 N 0.732
Eucgr.K01943 Eucalyptus grandis Eucgr.K01943 N 0.732
Eucgr.G03377 Eucalyptus grandis Eucgr.G03377 N 0.732
Gorai.011G004400 Gossypium raimondii Gorai.011G004400 N 0.732
estExt_fgenesh2_pg.C_Chr_130205 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_130205 N 0.732
BGIOSGA035844 Oryza indica BGIOSGA035844 N 0.732
SapurV1A.0563s0020 Salix purpurea SapurV1A.0563s0020 N 0.732
OGLUM12G20290 Oryza glumaepatula OGLUM12G20290 N 0.732
EuGene.0000150165 Micromonas pusilla EuGene.0000150165 N 0.732
PGSC0003DMG400007350 Solanum tuberosum PGSC0003DMG400007350 N 0.732
OBART12G18640 Oryza barthii OBART12G18640 N 0.732
OLONG_008329 Oryza longistaminata OLONG_008329 N 0.732
OMERI12G14030 Oryza meridionalis OMERI12G14030 N 0.732
ORGLA12G0159000 Oryza glaberrima ORGLA12G0159000 N 0.732
OPUNC12G16850 Oryza punctata OPUNC12G16850 N 0.732
ONIVA12G17590 Oryza nivara ONIVA12G17590 N 0.732
OS12G0613000 Oryza sativa OS12G0613000 N 0.732
Solyc11g065700.1 Solanum lycopersicum Solyc11g065700.1 N 0.732
PGSC0003DMG400011806 Solanum tuberosum PGSC0003DMG400011806 N 0.732
cassava31874.valid.m1 Manihot esculenta cassava31874.valid.m1 N 0.732
PK00926.1 Cannabis sativa PK00926.1 N 0.732
LPERR12G15680 Leersia perrieri LPERR12G15680 N 0.732
MDP0000278621 Malus domestica MDP0000278621 N 0.732
cassava31873.valid.m1 Manihot esculenta cassava31873.valid.m1 N 0.732
OB03G35340 Oryza brachyantha OB03G35340 N 0.732
cassava24161.valid.m1 Manihot esculenta cassava24161.valid.m1 N 0.732
MDP0000682805 Malus domestica MDP0000682805 N 0.732
POPTR_0011s10080 Populus trichocarpa POPTR_0011s10080 N 0.732
OB12G25340 Oryza brachyantha OB12G25340 N 0.732
ORUFI12G20840 Oryza rufipogon ORUFI12G20840 N 0.732
GLYMA09G02770 Glycine max GLYMA09G02770 N 0.722
LPERR03G22840 Leersia perrieri LPERR03G22840 N 0.722
GRMZM2G165488 Zea mays GRMZM2G165488 N 0.722
GLYMA15G13660 Glycine max GLYMA15G13660 N 0.722
BRADI4G01380 Brachypodium distachyon BRADI4G01380 N 0.722
orange1.1g026474m.g Citrus sinensis orange1.1g026474m.g N 0.714
PDK_20s1300541g001 Phoenix dactylifera PDK_20s1300541g001 I 0.714
Gorai.011G057600 Gossypium raimondii Gorai.011G057600 N 0.714
SapurV1A.0534s0150 Salix purpurea SapurV1A.0534s0150 N 0.714
Traes_4AS_2603E68AF Triticum aestivum Traes_4AS_2603E68AF I 0.714
OPUNC03G05290 Oryza punctata OPUNC03G05290 I 0.714
ONIVA03G05390 Oryza nivara ONIVA03G05390 I 0.714
OMERI03G05270 Oryza meridionalis OMERI03G05270 I 0.714
ORGLA03G0053200 Oryza glaberrima ORGLA03G0053200 I 0.714
ORUFI03G05370 Oryza rufipogon ORUFI03G05370 I 0.714
Solyc02g069860.2 Solanum lycopersicum Solyc02g069860.2 N 0.714
Si037269m.g Setaria italica Si037269m.g I 0.714
gene28941-v1.0-hybrid Fragaria vesca gene28941-v1.0-hybrid N 0.714
OGLUM03G05530 Oryza glumaepatula OGLUM03G05530 I 0.714
OBART03G05590 Oryza barthii OBART03G05590 I 0.714
LPERR03G04900 Leersia perrieri LPERR03G04900 I 0.714
F775_09086 Aegilops tauschii F775_09086 N 0.714
BGIOSGA011352 Oryza indica BGIOSGA011352 I 0.714
LPERR12G16030 Leersia perrieri LPERR12G16030 N 0.714
MLOC_62730 Hordeum vulgare MLOC_62730 I 0.714
OB12G25960 Oryza brachyantha OB12G25960 N 0.714
OB03G15670 Oryza brachyantha OB03G15670 I 0.714
Solyc10g079150.1 Solanum lycopersicum Solyc10g079150.1 N 0.714
OS03G0174900 Oryza sativa OS03G0174900 I 0.714
Cla009990 Citrullus lanatus Cla009990 N 0.714
VIT_10s0003g04650 Vitis vinifera VIT_10s0003g04650 N 0.714
Cucsa.048230 Cucumis sativus Cucsa.048230 N 0.714
TCM_026909 Theobroma cacao TCM_026909 N 0.714
Ciclev10016491m.g Citrus clementina Ciclev10016491m.g N 0.714
TRIUR3_28596 Triticum urartu TRIUR3_28596 N 0.714
Cucsa.374630 Cucumis sativus Cucsa.374630 I 0.714
Traes_4BL_7DA93696E Triticum aestivum Traes_4BL_7DA93696E I 0.714
TRIUR3_08409 Triticum urartu TRIUR3_08409 I 0.714
Traes_5AS_378F353CF Triticum aestivum Traes_5AS_378F353CF N 0.714
Traes_4DL_8156B39DF Triticum aestivum Traes_4DL_8156B39DF I 0.714
Traes_5DS_443F1993A Triticum aestivum Traes_5DS_443F1993A N 0.714
Traes_5BS_F1DE20B4B Triticum aestivum Traes_5BS_F1DE20B4B N 0.714
GLYMA05G29970 Glycine max GLYMA05G29970 N 0.704
Carubv10010359m.g Capsella rubella Carubv10010359m.g N 0.704
Bo1g134650 Brassica oleracea Bo1g134650 N 0.704
GLYMA07G04050 Glycine max GLYMA07G04050 I 0.704
AMTR_s00048p00192930 Amborella trichopoda AMTR_s00048p00192930 I 0.704
Bra021527 Brassica rapa Bra021527 N 0.704
Gorai.012G010900 Gossypium raimondii Gorai.012G010900 N 0.704
OB02G41320 Oryza brachyantha OB02G41320 I 0.704
Ca_07995 Cicer arietinum Ca_07995 N 0.704
MTR_2g030170 Medicago truncatula MTR_2g030170 N 0.704
Bostr.15697s0348 Boechera stricta Bostr.15697s0348 N 0.704
Cagra.1508s0155 Capsella grandiflora Cagra.1508s0155 N 0.704
GSMUA_Achr4G28390_001 Musa acuminata GSMUA_Achr4G28390_001 N 0.704