CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC03G33070
(
Oryza punctata
)
CBF/NF-Y,FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02045 (CBFB_NFYA)
PF03101 (FAR1)
IPR001289
IPR004330
OPUNC03G33070
T160929_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC03G33070.1
FAR1
29
77
DDEAAAAAGVGVGAEERCRAMMEVVKKDAVGGKWRVSKLVVEHNHEVEV
OPUNC03G33070.1
FAR1
104
192
GFYYGYGERVGFKARTGSNRRSVGNGVMIMQRFLCSRGNYANRRYKANGLGELKEEEVQEGAAGKRKRGANNKSRNRNLVKNHSEVIEV
OPUNC03G33070.1
CBF/NF-Y
295
356
LQARVLRELGLRASQYTNEERKKIVSKYLSKRQSRPVSARPAKIASRQALAERRKRGDGGRF
Links
Other
CBF/NF-Y,FAR1
family TFs
Other
Oryza punctata
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OGLUM03G35830
Oryza glumaepatula
OGLUM03G35830
N
0.724