CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra93994
(
Phytophthora ramorum
)
CENPB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04218 (CENP-B_N)
IPR006695
Phyra93994
T162164_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra93994
CENPB
70
121
KKRVRYLRDTERHNIVKRIEKGEKQAALAREYGVTRAAICHIKKNRDEIVTR
Links
Other
CENPB
family TFs
Other
Phytophthora ramorum
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Physo143269
Phytophthora sojae
Physo143269
N
0.865
maker-piw_contig_165-snap-gene-0.13
Pythium iwayamai
maker-piw_contig_165-snap-gene-0.13
N
0.827
maker-pir_contig_87-fgenesh-gene-0.17
Pythium irregulare
maker-pir_contig_87-fgenesh-gene-0.17
N
0.827
Phyra75006
Phytophthora ramorum
Phyra75006
N
0.827
fgenesh_scip_prom.28083.3870
Phytophthora lateralis
fgenesh_scip_prom.28083.3870
N
0.827
F443_02366
Phytophthora parasitica
F443_02366
N
0.827
PITG_12841
Phytophthora infestans
PITG_12841
N
0.808
PYU1_G007782
Pythium ultimum
PYU1_G007782
N
0.788
gw1.23.237.1
Phytophthora capsici
gw1.23.237.1
N
0.788
F443_02365
Phytophthora parasitica
F443_02365
N
0.769
PITG_12840
Phytophthora infestans
PITG_12840
N
0.769
maker-pve_contig_476-snap-gene-0.24
Pythium vexans
maker-pve_contig_476-snap-gene-0.24
N
0.750
Physo143270
Phytophthora sojae
Physo143270
N
0.731