CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GJ13141
(
Drosophila virilis
)
CENPB,Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04218 (CENP-B_N)
PF05225 (HTH_psq)
IPR006695
IPR007889
FBgn0200368
T162979_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0227558
Pipsqueak
355
399
INDALDLAAAAVLHEGLSLQKAADRYDISKTVLWRRVRSNPAYMR
FBpp0227558
CENPB
403
439
EKPSLSEAYERLKNGDSLKSISQDLHIPMSTLHRHKV
FBpp0227558
Pipsqueak
464
507
LRDKLAKAVHACINGGMSQNHAANLFEIPKSTLWRHLQRRVTEA
Links
Other
CENPB,Pipsqueak
family TFs
Other
Drosophila virilis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GH15392
Drosophila grimshawi
FBgn0122864
N
0.967
GI12997
Drosophila mojavensis
FBgn0135754
N
0.951
GA13965
Drosophila pseudoobscura
FBgn0073997
N
0.874
GF24271
Drosophila ananassae
FBgn0101265
N
0.862