OLONG_019207 (Oryza longistaminata)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 OLONG_019207 T163289_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CMTA2
M01901_2.00 		Arabidopsis thaliana
NNDVCGYGT
ACRCGBHNN		 PBM
Weirauch et al.(2014)
pTH7506 		0.726 0.726
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_019207-R1 CG-1 908 1014
OLONG_019207-R2 CG-1 900 966

Links

Other CG-1 family TFs
Other Oryza longistaminata TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ONIVA10G07200 Oryza nivara ONIVA10G07200 I 0.991
LPERR10G05550 Leersia perrieri LPERR10G05550 I 0.783
OB10G16130 Oryza brachyantha OB10G16130 I 0.783
OLONG_001033 Oryza longistaminata OLONG_001033 I 0.774
OGLUM10G07770 Oryza glumaepatula OGLUM10G07770 I 0.774
OGLUM03G06680 Oryza glumaepatula OGLUM03G06680 I 0.774
OBART03G06570 Oryza barthii OBART03G06570 I 0.774
OBART10G08060 Oryza barthii OBART10G08060 I 0.774
OLONG_003971 Oryza longistaminata OLONG_003971 I 0.774
ONIVA02G06230 Oryza nivara ONIVA02G06230 I 0.774
OS03G0191000 Oryza sativa OS03G0191000 I 0.774
OS10G0375600 Oryza sativa OS10G0375600 I 0.774
ORUFI10G08490 Oryza rufipogon ORUFI10G08490 I 0.774
ORUFI03G06510 Oryza rufipogon ORUFI03G06510 I 0.774
ONIVA10G07730 Oryza nivara ONIVA10G07730 I 0.774
ORGLA10G0066800 Oryza glaberrima ORGLA10G0066800 I 0.774
OMERI03G06500 Oryza meridionalis OMERI03G06500 I 0.774
ORGLA03G0064000 Oryza glaberrima ORGLA03G0064000 I 0.774
BGIOSGA011302 Oryza indica BGIOSGA011302 I 0.774
OB03G16740 Oryza brachyantha OB03G16740 I 0.764
LPERR03G05920 Leersia perrieri LPERR03G05920 I 0.764
Sb0012s010230 Sorghum bicolor Sb0012s010230 I 0.755
Aquca_008_00132 Aquilegia coerulea Aquca_008_00132 I 0.755
GRMZM2G341747 Zea mays GRMZM2G341747 I 0.755
Pavir.Ia02749 Panicum virgatum Pavir.Ia02749 I 0.755
Pavir.Ib02991 Panicum virgatum Pavir.Ib02991 I 0.755
OMERI03G17850 Oryza meridionalis OMERI03G17850 I 0.745
Aquca_010_00201 Aquilegia coerulea Aquca_010_00201 I 0.745
ONIVA03G21570 Oryza nivara ONIVA03G21570 I 0.745
ORUFI03G20520 Oryza rufipogon ORUFI03G20520 I 0.745
Solyc04g056270.2 Solanum lycopersicum Solyc04g056270.2 I 0.745
Sb01g044480 Sorghum bicolor Sb01g044480 I 0.745
BGIOSGA012779 Oryza indica BGIOSGA012779 I 0.745
GSMUA_Achr3G21310_001 Musa acuminata GSMUA_Achr3G21310_001 I 0.745
OGLUM03G20490 Oryza glumaepatula OGLUM03G20490 I 0.745
OBART03G19880 Oryza barthii OBART03G19880 I 0.745
mgf024932m Mimulus guttatus mgf024932m I 0.736
Pavir.J35200 Panicum virgatum Pavir.J35200 I 0.736
Eucgr.H04783 Eucalyptus grandis Eucgr.H04783 I 0.736
Bo4g136970 Brassica oleracea Bo4g136970 I 0.735
Si028797m.g Setaria italica Si028797m.g I 0.726
Si034054m.g Setaria italica Si034054m.g I 0.726
Bostr.0568s0382 Boechera stricta Bostr.0568s0382 I 0.726
Gorai.005G220600 Gossypium raimondii Gorai.005G220600 I 0.726
Pavir.Ia03131 Panicum virgatum Pavir.Ia03131 I 0.726
Carubv10025787m.g Capsella rubella Carubv10025787m.g I 0.726
Cagra.0248s0103 Capsella grandiflora Cagra.0248s0103 I 0.726
Traes_5BL_92902F993 Triticum aestivum Traes_5BL_92902F993 I 0.726
scaffold_803130.1 Arabidopsis lyrata scaffold_803130.1 I 0.726
TCM_001108 Theobroma cacao TCM_001108 I 0.726
Sb02g039710 Sorghum bicolor Sb02g039710 I 0.726
GLYMA08G19101 Glycine max GLYMA08G19101 I 0.726
GSMUA_Achr1G21540_001 Musa acuminata GSMUA_Achr1G21540_001 I 0.726
CMTA2 Arabidopsis thaliana AT5G64220 D 0.726
Bo9g018010 Brassica oleracea Bo9g018010 I 0.726
28281.m000379 Ricinus communis 28281.m000379 I 0.722
Si034076m.g Setaria italica Si034076m.g I 0.719
MLOC_63299 Hordeum vulgare MLOC_63299 I 0.717
Lus10003405.g Linum usitatissimum Lus10003405.g I 0.717
TRIUR3_23040 Triticum urartu TRIUR3_23040 I 0.717
GSMUA_AchrUn_randomG02100_001 Musa acuminata GSMUA_AchrUn_randomG02100_001 I 0.717
Ca_05255 Cicer arietinum Ca_05255 I 0.717
evm.TU.supercontig_213.9 Carica papaya evm.TU.supercontig_213.9 I 0.717
AMTR_s00038p00173360 Amborella trichopoda AMTR_s00038p00173360 I 0.717
Pavir.J38535 Panicum virgatum Pavir.J38535 I 0.711
BRADI3G23800 Brachypodium distachyon BRADI3G23800 I 0.711
OPUNC10G06950 Oryza punctata OPUNC10G06950 I 0.711
BGIOSGA032809 Oryza indica BGIOSGA032809 I 0.711
GSMUA_Achr6G10390_001 Musa acuminata GSMUA_Achr6G10390_001 I 0.711
chr4.CM0182.510.nc Lotus japonicus chr4.CM0182.510.nc I 0.708
Gorai.013G061100 Gossypium raimondii Gorai.013G061100 I 0.708
GSMUA_AchrUn_randomG08930_001 Musa acuminata GSMUA_AchrUn_randomG08930_001 I 0.708
Bra009382 Brassica rapa Bra009382 I 0.708
SELMODRAFT_441667 Selaginella moellendorffii SELMODRAFT_441667 I 0.708
SELMODRAFT_413101 Selaginella moellendorffii SELMODRAFT_413101 I 0.708
Eucgr.I02662 Eucalyptus grandis Eucgr.I02662 I 0.708
Bo9g174050 Brassica oleracea Bo9g174050 I 0.708
F775_29292 Aegilops tauschii F775_29292 I 0.702
GRMZM2G447551 Zea mays GRMZM2G447551 I 0.702
Traes_4AL_2F7E6536A Triticum aestivum Traes_4AL_2F7E6536A I 0.702
Traes_4DL_C2F35966E Triticum aestivum Traes_4DL_C2F35966E I 0.702
MLOC_38704 Hordeum vulgare MLOC_38704 I 0.702
BRADI1G71810 Brachypodium distachyon BRADI1G71810 I 0.702