CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ONIVA10G07200
(
Oryza nivara
)
CG-1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03859 (CG-1)
IPR005559
ONIVA10G07200
T163299_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CMTA2
M01901_2.00
Arabidopsis thaliana
NNDVCGYGT
ACRCGBHNN
PBM
Weirauch et al.(2014)
pTH7506
0.737
0.737
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA10G07200.1
CG-1
967
1081
DAINRWLCPSEICEILKNYRSFFLATEPPNKPPSGSLFVFDRKILRYFRNDGHNWRKKKDEMTVKEDHERLKSGSIDVLECYYAHGEENENFQRRMYRMLEEDVKHIILVHYLEI
ONIVA10G07200.2
CG-1
967
1073
DAINRWLCPSEICEILKNYRSFFLATEPPNKPPSGSLFVFDRKILRYFRNDGHNWRKKKDEMTVKEDHERLKSGSIDVLECYYAHGEENENFQRRMYRMLEDATGDS
ONIVA10G07200.3
CG-1
960
1033
YKPMVVSQNDGHNWRKKKDEMTVKEDHERLKSGSIDVLECYYAHGEENENFQRRMYRMLEEDVKHIILVHYLEI
ONIVA10G07200.4
CG-1
831
904
YKPMVVSQNDGHNWRKKKDEMTVKEDHERLKSGSIDVLECYYAHGEENENFQRRMYRMLEEDVKHIILVHYLEI
ONIVA10G07200.5
CG-1
967
1081
DAINRWLCPSEICEILKNYRSFFLATEPPNKPPSGSLFVFDRKILRYFRNDGHNWRKKKDEMTVKEDHERLKSGSIDVLECYYAHGEENENFQRRMYRMLEEDVKHIILVHYLEI
Links
Other
CG-1
family TFs
Other
Oryza nivara
TFs
145 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy