CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_003_00568
(
Aquilegia coerulea
)
CG-1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03859 (CG-1)
IPR005559
Aquca_003_00568
T163487_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CAMTA5
M06827_2.00
Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN
NACRCGBNDHNNACRCBN
Dap-seq
OMalley et al.(2016)
CAMTA5_col_a
0.860
0.860
Q2WEL1_ORYSA
M10406_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBT_01
0.719
0.719
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_003_00568.1
CG-1
32
146
EAKTRWLRPNEIHAILYNHNIFTIHVKPVHLPRSGLIVLFDRKKLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDNPGFVRRCYWLLDKTYEHVVLVHYRET
Aquca_003_00568.2
CG-1
32
146
EAKTRWLRPNEIHAILYNHNIFTIHVKPVHLPRSGLIVLFDRKKLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDNPGFVRRCYWLLDKTYEHVVLVHYRET
Aquca_003_00568.3
CG-1
32
146
EAKTRWLRPNEIHAILYNHNIFTIHVKPVHLPRSGLIVLFDRKKLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDNPGFVRRCYWLLDKTYEHVVLVHYRET
Links
Other
CG-1
family TFs
Other
Aquilegia coerulea
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy