Gorai.004G075100 (Gossypium raimondii)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 Gorai.004G075100 T163533_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CAMTA5
M06827_2.00
Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN

NACRCGBNDHNNACRCBN
Dap-seq
OMalley et al.(2016)
CAMTA5_col_a
0.816 0.816
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G075100.1 CG-1 16 103
Gorai.004G075100.2 CG-1 1 85
Gorai.004G075100.3 CG-1 1 85
Gorai.004G075100.4 CG-1 1 85
Gorai.004G075100.5 CG-1 1 85

Links

Other CG-1 family TFs
Other Gossypium raimondii TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CG43689 Drosophila melanogaster FBgn0263772 I 0.000
AAEL001230 Aedes aegypti AAEL001230 N 0.000
ACHR008455 Anopheles christyi ACHR008455 N 0.000
ACUA023712 Anopheles culicifacies ACUA023712 N 0.000
ADIR004650 Anopheles dirus ADIR004650 N 0.000
AFUN000252 Anopheles funestus AFUN000252 N 0.000
AMEC011182 Anopheles melas AMEC011182 N 0.000
AMIN005800 Anopheles minimus AMIN005800 N 0.000
AQUA002448 Anopheles quadriannulatus AQUA002448 N 0.000
ASIS023610 Anopheles sinensis ASIS023610 N 0.000
ASTEI01189 Anopheles stephensi ASTEI01189 N 0.000
D917_04267 Trichinella nativa D917_04267 N 0.000
D918_01045 Trichuris suis D918_01045 N 0.000
AARA002561 Anopheles arabiensis AARA002561 N 0.000
LDEC007508 Leptinotarsa decemlineata LDEC007508 N 0.000
AGAP000875 Anopheles gambiae AGAP000875 N 0.000
CGI_10022679 Crassostrea gigas CGI_10022679 N 0.000
ST18 Callithrix jacchus ENSCJAG00000014630 N 0.000
ENSCSAVG00000009233 Ciona savignyi ENSCSAVG00000009233 N 0.000
ENSGMOG00000000679 Gadus morhua ENSGMOG00000000679 N 0.000
ENSMEUG00000001386 Macropus eugenii ENSMEUG00000001386 N 0.000
ENSPMAG00000001124 Petromyzon marinus ENSPMAG00000001124 N 0.000
MYT1L Pteropus vampyrus ENSPVAG00000001625 N 0.000
MYT1 Takifugu rubripes ENSTRUG00000002124 N 0.000
MCINX013435 Melitaea cinxia MCINX013435 N 0.000
SINV15347 Solenopsis invicta SINV15347 N 0.000
TMUE_s0020007600 Trichuris muris TMUE_s0020007600 N 0.000