AMTR_s00041p00167350 (Amborella trichopoda)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 AMTR_s00041p00167350 T164264_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERN13385 CSD 3 69

Links

Other CSD family TFs
Other Amborella trichopoda TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28288.m000014 Ricinus communis 28288.m000014 I 0.000
29610.m000410 Ricinus communis 29610.m000410 I 0.000
29681.m001296 Ricinus communis 29681.m001296 I 0.000
AT2G38090 Arabidopsis thaliana AT2G38090 D 0.000
AT3G11280 Arabidopsis thaliana AT3G11280 D 0.000
AT5G05790 Arabidopsis thaliana AT5G05790 D 0.000
Bo1g141120 Brassica oleracea Bo1g141120 I 0.000
Bo3g032160 Brassica oleracea Bo3g032160 I 0.000
Bo4g029810 Brassica oleracea Bo4g029810 I 0.000
Bo4g187390 Brassica oleracea Bo4g187390 I 0.000
Bo5g136680 Brassica oleracea Bo5g136680 I 0.000
Bo9g135730 Brassica oleracea Bo9g135730 I 0.000
Bo9g176900 Brassica oleracea Bo9g176900 I 0.000
Bostr.13129s0394 Boechera stricta Bostr.13129s0394 I 0.000
Bostr.19424s1061 Boechera stricta Bostr.19424s1061 I 0.000
Bostr.23794s0264 Boechera stricta Bostr.23794s0264 I 0.000
Bra000038 Brassica rapa Bra000038 I 0.000
Bra005139 Brassica rapa Bra005139 I 0.000
Bra009134 Brassica rapa Bra009134 I 0.000
Bra017138 Brassica rapa Bra017138 I 0.000
Bra034173 Brassica rapa Bra034173 I 0.000
Bra034853 Brassica rapa Bra034853 I 0.000
Cagra.0090s0025 Capsella grandiflora Cagra.0090s0025 I 0.000
Cagra.1655s0043 Capsella grandiflora Cagra.1655s0043 I 0.000
Cagra.5131s0007 Capsella grandiflora Cagra.5131s0007 I 0.000
Carubv10001695m.g Capsella rubella Carubv10001695m.g I 0.000
Carubv10014411m.g Capsella rubella Carubv10014411m.g I 0.000
Carubv10023736m.g Capsella rubella Carubv10023736m.g I 0.000
cassava1257.valid.m1 Manihot esculenta cassava1257.valid.m1 I 0.000
cassava23356.valid.m1 Manihot esculenta cassava23356.valid.m1 I 0.000
cassava26873.m1 Manihot esculenta cassava26873.m1 I 0.000
cassava30173.valid.m1 Manihot esculenta cassava30173.valid.m1 I 0.000
cassava43688.valid.m1 Manihot esculenta cassava43688.valid.m1 I 0.000
Ca_12513 Cicer arietinum Ca_12513 I 0.000
Ca_19327 Cicer arietinum Ca_19327 I 0.000
Ciclev10012285m.g Citrus clementina Ciclev10012285m.g I 0.000
Ciclev10028910m.g Citrus clementina Ciclev10028910m.g I 0.000
Ciclev10032309m.g Citrus clementina Ciclev10032309m.g I 0.000
Cla004397 Citrullus lanatus Cla004397 I 0.000
Cla013553 Citrullus lanatus Cla013553 I 0.000
Cucsa.139090 Cucumis sativus Cucsa.139090 I 0.000
Cucsa.164580 Cucumis sativus Cucsa.164580 I 0.000
Eucgr.G03029 Eucalyptus grandis Eucgr.G03029 I 0.000
evm.TU.supercontig_112.58 Carica papaya evm.TU.supercontig_112.58 I 0.000
evm.TU.supercontig_1130.1 Carica papaya evm.TU.supercontig_1130.1 I 0.000
evm.TU.supercontig_19.216 Carica papaya evm.TU.supercontig_19.216 I 0.000
evm.TU.supercontig_19.217 Carica papaya evm.TU.supercontig_19.217 I 0.000
fgenesh2_kg.3__1170__AT3G11280.1 Arabidopsis lyrata fgenesh2_kg.3__1170__AT3G11280.1 I 0.000
fgenesh2_kg.4__1876__AT2G38090.1 Arabidopsis lyrata fgenesh2_kg.4__1876__AT2G38090.1 I 0.000
gene18815-v1.0-hybrid Fragaria vesca gene18815-v1.0-hybrid I 0.000
gene20912-v1.0-hybrid Fragaria vesca gene20912-v1.0-hybrid I 0.000
GLYMA01G27720 Glycine max GLYMA01G27720 I 0.000
GLYMA02G39000 Glycine max GLYMA02G39000 I 0.000
GLYMA02G42140 Glycine max GLYMA02G42140 I 0.000
GLYMA03G14440 Glycine max GLYMA03G14440 I 0.000
GLYMA07G17660 Glycine max GLYMA07G17660 I 0.000
GLYMA11G34930 Glycine max GLYMA11G34930 I 0.000
GLYMA14G37050 Glycine max GLYMA14G37050 I 0.000
GLYMA18G03430 Glycine max GLYMA18G03430 I 0.000
GLYMA18G42530 Glycine max GLYMA18G42530 I 0.000
Gorai.002G261600 Gossypium raimondii Gorai.002G261600 I 0.000
Gorai.006G180900 Gossypium raimondii Gorai.006G180900 I 0.000
Gorai.007G378300 Gossypium raimondii Gorai.007G378300 I 0.000
Gorai.009G093700 Gossypium raimondii Gorai.009G093700 I 0.000
Gorai.012G075600 Gossypium raimondii Gorai.012G075600 I 0.000
Gorai.012G112000 Gossypium raimondii Gorai.012G112000 I 0.000
Lus10009884.g Linum usitatissimum Lus10009884.g I 0.000
Lus10014837.g Linum usitatissimum Lus10014837.g I 0.000
Lus10018209.g Linum usitatissimum Lus10018209.g I 0.000
Lus10028264.g Linum usitatissimum Lus10028264.g I 0.000
MDP0000142580 Malus domestica MDP0000142580 I 0.000
MDP0000221993 Malus domestica MDP0000221993 I 0.000
MDP0000277813 Malus domestica MDP0000277813 I 0.000
MTR_5g081860 Medicago truncatula MTR_5g081860 I 0.000
MTR_7g067080 Medicago truncatula MTR_7g067080 I 0.000
orange1.1g021756m.g Citrus sinensis orange1.1g021756m.g I 0.000
orange1.1g021816m.g Citrus sinensis orange1.1g021816m.g I 0.000
orange1.1g023196m.g Citrus sinensis orange1.1g023196m.g I 0.000
PGSC0003DMG400019129 Solanum tuberosum PGSC0003DMG400019129 I 0.000
PGSC0003DMG400027126 Solanum tuberosum PGSC0003DMG400027126 I 0.000
PK15104.1 Cannabis sativa PK15104.1 I 0.000
PK27213.1 Cannabis sativa PK27213.1 D 0.000
PK27693.1 Cannabis sativa PK27693.1 D 0.000
Pm002536 Prunus mume Pm002536 I 0.000
Pm018878 Prunus mume Pm018878 I 0.000
POPTR_0001s25590 Populus trichocarpa POPTR_0001s25590 I 0.000
POPTR_0006s09860 Populus trichocarpa POPTR_0006s09860 I 0.000
POPTR_0008s06450 Populus trichocarpa POPTR_0008s06450 I 0.000
POPTR_0009s04730 Populus trichocarpa POPTR_0009s04730 I 0.000
POPTR_0010s20040 Populus trichocarpa POPTR_0010s20040 I 0.000
POPTR_0016s11980 Populus trichocarpa POPTR_0016s11980 I 0.000
PRUPE_ppa009103mg Prunus persica PRUPE_ppa009103mg I 0.000
PRUPE_ppa018139mg Prunus persica PRUPE_ppa018139mg I 0.000
SapurV1A.0001s0790 Salix purpurea SapurV1A.0001s0790 I 0.000
SapurV1A.0262s0080 Salix purpurea SapurV1A.0262s0080 I 0.000
SapurV1A.0709s0190 Salix purpurea SapurV1A.0709s0190 I 0.000
SapurV1A.0778s0020 Salix purpurea SapurV1A.0778s0020 I 0.000
SapurV1A.3589s0010 Salix purpurea SapurV1A.3589s0010 I 0.000
scaffold_600551.1 Arabidopsis lyrata scaffold_600551.1 I 0.000
Solyc03g096350.2 Solanum lycopersicum Solyc03g096350.2 I 0.000
Solyc05g052610.2 Solanum lycopersicum Solyc05g052610.2 I 0.000
Solyc10g076820.1 Solanum lycopersicum Solyc10g076820.1 I 0.000
TCM_021750 Theobroma cacao TCM_021750 I 0.000
TCM_041672 Theobroma cacao TCM_041672 I 0.000
TCM_042604 Theobroma cacao TCM_042604 I 0.000
Thhalv10014370m.g Eutrema salsugineum Thhalv10014370m.g I 0.000
Thhalv10017008m.g Eutrema salsugineum Thhalv10017008m.g I 0.000
Thhalv10021322m.g Eutrema salsugineum Thhalv10021322m.g I 0.000
VIT_08s0007g01920 Vitis vinifera VIT_08s0007g01920 I 0.000
VIT_13s0019g03370 Vitis vinifera VIT_13s0019g03370 I 0.000