CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CapteG69814
(
Capitella teleta
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00313 (CSD)
IPR002059
CapteG69814
T164338_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
YBX1
M04661_2.00
Homo sapiens
GRTGGWACR
YGTWCCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX
0.796
0.796
YBX1
M10411_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q3
0.796
0.796
YBX1
M10412_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q4
0.796
0.796
YBX1
M04662_2.00
Homo sapiens
GRTGKDRCD
HGYHMCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX
0.796
0.796
NEMVEDRAFT_v1g104083
M01207_2.00
Nematostella vectensis
NNNDDHRN
NYDHHNNN
PBM
Lambert et al.(2019)
pTH9768
0.776
0.776
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CapteP69814
CSD
8
60
VTGEVKWSNVRRGYGFINRDDTQEDVFVHHTAIVKNNPHKYLRSVGDGEKAEF
Links
Other
CSD
family TFs
Other
Capitella teleta
TFs
108 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CapteG58124
Capitella teleta
CapteG58124
I
0.918
CapteG50376
Capitella teleta
CapteG50376
I
0.898
CapteG166603
Capitella teleta
CapteG166603
I
0.878
e_gw.440.24.1
Branchiostoma floridae
e_gw.440.24.1
I
0.816
ENSGMOG00000015216
Gadus morhua
ENSGMOG00000015216
I
0.816
ENSPPYG00000004279
Pongo abelii
ENSPPYG00000004279
I
0.796
ENSPFOG00000011441
Poecilia formosa
ENSPFOG00000011441
I
0.796
ENSPANG00000016576
Papio anubis
ENSPANG00000016576
I
0.796
ENSPANG00000013156
Papio anubis
ENSPANG00000013156
I
0.796
ENSPSIG00000009247
Pelodiscus sinensis
ENSPSIG00000009247
I
0.796
ENSPSIG00000011017
Pelodiscus sinensis
ENSPSIG00000011017
I
0.796
Ybx3
Rattus norvegicus
ENSRNOG00000005480
I
0.796
YBX3
Pteropus vampyrus
ENSPVAG00000006740
I
0.796
YBX1
Pteropus vampyrus
ENSPVAG00000005504
I
0.796
ENSPANG00000010280
Papio anubis
ENSPANG00000010280
I
0.796
ybx1
Oryzias latipes
ENSORLG00000004225
I
0.796
ENSOARG00000020447
Ovis aries
ENSOARG00000020447
I
0.796
Ybx1
Mus musculus
ENSMUSG00000028639
I
0.796
YBX1
Ornithorhynchus anatinus
ENSOANG00000011725
I
0.796
ENSOANG00000001663
Ornithorhynchus anatinus
ENSOANG00000001663
I
0.796
ENSOARG00000020919
Ovis aries
ENSOARG00000020919
I
0.796
YBX1
Otolemur garnettii
ENSOGAG00000006784
I
0.796
ENSONIG00000018954
Oreochromis niloticus
ENSONIG00000018954
I
0.796
ENSONIG00000002062
Oreochromis niloticus
ENSONIG00000002062
I
0.796
Ybx1
Rattus norvegicus
ENSRNOG00000023786
I
0.796
ENSNLEG00000012324
Nomascus leucogenys
ENSNLEG00000012324
I
0.796
YBX3
Sus scrofa
ENSSSCG00000000633
I
0.796
Gfo_R007354
Geospiza fortis
Gfo_R007354
I
0.796
ENSP00000228251
Macaca fascicularis
ENSP00000228251
I
0.796
ENSBTAP00000012735-D1
Bos grunniens
ENSBTAP00000012735-D1
I
0.796
Brh_R007443
Buceros rhinoceros
Brh_R007443
I
0.796
Pvit_10025
Pogona vitticeps
Pvit_10025
I
0.796
AAH42217
Xenopus laevis
AAH42217
I
0.796
ybx1.S
Xenopus laevis
XB-GENE-865405
I
0.796
ybx1
Xenopus tropicalis
XB-GENE-480746
I
0.796
CAA42778
Xenopus laevis
CAA42778
I
0.796
AAI30161
Xenopus laevis
AAI30161
I
0.796
Afo_R014263
Aptenodytes forsteri
Afo_R014263
I
0.796
Aan_R014295
Calypte anna
Aan_R014295
I
0.796
YBX1
Taeniopygia guttata
ENSTGUG00000017262
I
0.796
YBX3
Taeniopygia guttata
ENSTGUG00000012047
I
0.796
YBX3
Tupaia belangeri
ENSTBEG00000012570
I
0.796
YBX1
Monodelphis domestica
ENSMODG00000017214
I
0.796
ybx1
Tetraodon nigroviridis
ENSTNIG00000011989
I
0.796
ybx1
Takifugu rubripes
ENSTRUG00000015333
I
0.796
Aan_R001440
Calypte anna
Aan_R001440
I
0.796
ENSXMAG00000018674
Xiphophorus maculatus
ENSXMAG00000018674
I
0.796
YBX1
Vicugna pacos
ENSVPAG00000000068
I
0.796
ENSSHAG00000014452
Sarcophilus harrisii
ENSSHAG00000014452
I
0.796
Ybx3
Mus musculus
ENSMUSG00000030189
I
0.796
ENSAMEG00000000494
Ailuropoda melanoleuca
ENSAMEG00000000494
I
0.796
YBX3
Macaca mulatta
ENSMMUG00000022469
I
0.796
ENSCSAG00000008744
Chlorocebus sabaeus
ENSCSAG00000008744
I
0.796
YBX3
Cavia porcellus
ENSCPOG00000011329
I
0.796
CapteG48741
Capitella teleta
CapteG48741
I
0.796
ybx1
Danio rerio
ENSDARG00000004757
I
0.796
ENSAPLG00000003147
Anas platyrhynchos
ENSAPLG00000003147
I
0.796
ENSECAG00000008961
Equus caballus
ENSECAG00000008961
I
0.796
Ybx3
Dipodomys ordii
ENSDORG00000009103
I
0.796
YBX1
Cavia porcellus
ENSCPOG00000010888
I
0.796
ENSAMEG00000009393
Ailuropoda melanoleuca
ENSAMEG00000009393
I
0.796
YBX1
Canis familiaris
ENSCAFG00000002541
I
0.796
YBX1
Bos taurus
ENSBTAG00000017368
I
0.796
YBX3
Bos taurus
ENSBTAG00000009663
I
0.796
YBX3
Canis familiaris
ENSCAFG00000013401
I
0.796
ENSAMXG00000014478
Astyanax mexicanus
ENSAMXG00000014478
I
0.796
ENSCJAG00000021660
Callithrix jacchus
ENSCJAG00000021660
I
0.796
ENSCJAG00000003155
Callithrix jacchus
ENSCJAG00000003155
I
0.796
YBX3
Choloepus hoffmanni
ENSCHOG00000011988
I
0.796
ENSECAG00000023592
Equus caballus
ENSECAG00000023592
I
0.796
YBX3
Equus caballus
ENSECAG00000013777
I
0.796
YBX3
Loxodonta africana
ENSLAFG00000017247
I
0.796
ENSLAFG00000007597
Loxodonta africana
ENSLAFG00000007597
I
0.796
YBX1
Erinaceus europaeus
ENSEEUG00000005657
I
0.796
ENSLOCG00000002530
Lepisosteus oculatus
ENSLOCG00000002530
I
0.796
YBX1
Meleagris gallopavo
ENSMGAG00000006879
I
0.796
ENSMMUG00000013136
Macaca mulatta
ENSMMUG00000013136
I
0.796
ENSMICG00000014984
Microcebus murinus
ENSMICG00000014984
I
0.796
YBX3
Meleagris gallopavo
ENSMGAG00000014224
I
0.796
YBX3
Gorilla gorilla
ENSGGOG00000001352
I
0.796
ENSLACG00000018135
Latimeria chalumnae
ENSLACG00000018135
I
0.796
YBX3
Felis catus
ENSFCAG00000027748
I
0.796
YBX3
Homo sapiens
ENSG00000060138
I
0.796
ENSFALG00000003661
Ficedula albicollis
ENSFALG00000003661
I
0.796
YBX3
Echinops telfairi
ENSETEG00000002557
I
0.796
YBX3
Erinaceus europaeus
ENSEEUG00000010415
I
0.796
ENSGALG00000018512
Gallus gallus
ENSGALG00000018512
I
0.796
YBX1
Homo sapiens
ENSG00000065978
D
0.796
YBX1
Gallus gallus
ENSGALG00000004848
I
0.796
ybx1
Gasterosteus aculeatus
ENSGACG00000006447
I
0.796
Sakowv30002198m.g
Saccoglossus kowalevskii
Sakowv30002198m.g
I
0.776
CapteG201202
Capitella teleta
CapteG201202
I
0.763
ENSCJAG00000035469
Callithrix jacchus
ENSCJAG00000035469
I
0.755
RPRC001993
Rhodnius prolixus
RPRC001993
I
0.755
ENSCJAG00000031567
Callithrix jacchus
ENSCJAG00000031567
I
0.755
SPU_003107
Strongylocentrotus purpuratus
SPU_003107
I
0.755
ENSSTOG00000027979
Ictidomys tridecemlineatus
ENSSTOG00000027979
I
0.735
ENSCAFG00000016520
Canis familiaris
ENSCAFG00000016520
I
0.735
ENSMPUG00000018977
Mustela putorius furo
ENSMPUG00000018977
I
0.735
ENSSTOG00000026413
Ictidomys tridecemlineatus
ENSSTOG00000026413
I
0.735
ENSSTOG00000022212
Ictidomys tridecemlineatus
ENSSTOG00000022212
I
0.735
ENSCAFG00000016523
Canis familiaris
ENSCAFG00000016523
I
0.735
ENSCJAG00000033824
Callithrix jacchus
ENSCJAG00000033824
I
0.735
T265_06248
Opisthorchis viverrini
T265_06248
I
0.714
MhA1_Contig2458.frz3.gene1
Meloidogyne hapla
MhA1_Contig2458.frz3.gene1
I
0.714
Minc12652
Meloidogyne incognita
Minc12652
I
0.714
genemark-nMf.1.1.scaf00296-processed-gene-0.4
Meloidogyne floridensis
genemark-nMf.1.1.scaf00296-processed-gene-0.4
I
0.714
CLEC013417
Cimex lectularius
CLEC013417
I
0.700