CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BTMF_0000180501
(
Brugia timori
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
BTMF_0000180501
T165735_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NEMVEDRAFT_v1g104083
M01207_2.00
Nematostella vectensis
NNNDDHRN
NYDHHNNN
PBM
Lambert et al.(2019)
pTH9768
0.717
0.717
cey-1
M01903_2.00
Caenorhabditis elegans
NNNGRTRDD
HHYAYCNNN
PBM
Weirauch et al.(2014)
pTH8991
0.717
0.717
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BTMF_0000180501-mRNA-1
CSD
62
118
IQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVSFIYLN
Links
Other
CSD
family TFs
Other
Brugia timori
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29916.m000544
Ricinus communis
29916.m000544
N
0.000
cassava30062.valid.m1
Manihot esculenta
cassava30062.valid.m1
N
0.000
Ciclev10018916m.g
Citrus clementina
Ciclev10018916m.g
N
0.000
Cla005738
Citrullus lanatus
Cla005738
N
0.000
Cucsa.320850
Cucumis sativus
Cucsa.320850
N
0.000
evm.TU.supercontig_29.139
Carica papaya
evm.TU.supercontig_29.139
N
0.000
gene31749-v1.0-hybrid
Fragaria vesca
gene31749-v1.0-hybrid
N
0.000
Gorai.003G170700
Gossypium raimondii
Gorai.003G170700
N
0.000
Gorai.004G200600
Gossypium raimondii
Gorai.004G200600
N
0.000
Gorai.008G238300
Gossypium raimondii
Gorai.008G238300
N
0.000
Lus10004353.g
Linum usitatissimum
Lus10004353.g
N
0.000
Lus10028934.g
Linum usitatissimum
Lus10028934.g
N
0.000
MDP0000275704
Malus domestica
MDP0000275704
N
0.000
orange1.1g042460m.g
Citrus sinensis
orange1.1g042460m.g
N
0.000
PK22905.1
Cannabis sativa
PK22905.1
N
0.000
Pm023512
Prunus mume
Pm023512
N
0.000
POPTR_0001s00480
Populus trichocarpa
POPTR_0001s00480
N
0.000
POPTR_0003s11020
Populus trichocarpa
POPTR_0003s11020
N
0.000
SapurV1A.0324s0040
Salix purpurea
SapurV1A.0324s0040
N
0.000
SapurV1A.0325s0140
Salix purpurea
SapurV1A.0325s0140
N
0.000
TCM_015991
Theobroma cacao
TCM_015991
N
0.000
VIT_02s0154g00400
Vitis vinifera
VIT_02s0154g00400
N
0.000