BTMF_0000180501 (Brugia timori)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 BTMF_0000180501 T165735_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NEMVEDRAFT_v1g104083
M01207_2.00
Nematostella vectensis
NNNDDHRN

NYDHHNNN
PBM
Lambert et al.(2019)
pTH9768
0.717 0.717
cey-1
M01903_2.00
Caenorhabditis elegans
NNNGRTRDD

HHYAYCNNN
PBM
Weirauch et al.(2014)
pTH8991
0.717 0.717
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BTMF_0000180501-mRNA-1 CSD 62 118

Links

Other CSD family TFs
Other Brugia timori TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29916.m000544 Ricinus communis 29916.m000544 N 0.000
cassava30062.valid.m1 Manihot esculenta cassava30062.valid.m1 N 0.000
Ciclev10018916m.g Citrus clementina Ciclev10018916m.g N 0.000
Cla005738 Citrullus lanatus Cla005738 N 0.000
Cucsa.320850 Cucumis sativus Cucsa.320850 N 0.000
evm.TU.supercontig_29.139 Carica papaya evm.TU.supercontig_29.139 N 0.000
gene31749-v1.0-hybrid Fragaria vesca gene31749-v1.0-hybrid N 0.000
Gorai.003G170700 Gossypium raimondii Gorai.003G170700 N 0.000
Gorai.004G200600 Gossypium raimondii Gorai.004G200600 N 0.000
Gorai.008G238300 Gossypium raimondii Gorai.008G238300 N 0.000
Lus10004353.g Linum usitatissimum Lus10004353.g N 0.000
Lus10028934.g Linum usitatissimum Lus10028934.g N 0.000
MDP0000275704 Malus domestica MDP0000275704 N 0.000
orange1.1g042460m.g Citrus sinensis orange1.1g042460m.g N 0.000
PK22905.1 Cannabis sativa PK22905.1 N 0.000
Pm023512 Prunus mume Pm023512 N 0.000
POPTR_0001s00480 Populus trichocarpa POPTR_0001s00480 N 0.000
POPTR_0003s11020 Populus trichocarpa POPTR_0003s11020 N 0.000
SapurV1A.0324s0040 Salix purpurea SapurV1A.0324s0040 N 0.000
SapurV1A.0325s0140 Salix purpurea SapurV1A.0325s0140 N 0.000
TCM_015991 Theobroma cacao TCM_015991 N 0.000
VIT_02s0154g00400 Vitis vinifera VIT_02s0154g00400 N 0.000