PTRK_0000574400 (Parastrongyloides trichosuri)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 PTRK_0000574400 T165873_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
YBX1
M04661_2.00
Homo sapiens
GRTGGWACR

YGTWCCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX
0.727 0.727
YBX1
M10411_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q3
0.727 0.727
YBX1
M10412_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q4
0.727 0.727
YBX1
M04662_2.00
Homo sapiens
GRTGKDRCD

HGYHMCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX
0.727 0.727
NEMVEDRAFT_v1g104083
M01207_2.00
Nematostella vectensis
NNNDDHRN

NYDHHNNN
PBM
Lambert et al.(2019)
pTH9768
0.712 0.712
cey-1
M01903_2.00
Caenorhabditis elegans
NNNGRTRDD

HHYAYCNNN
PBM
Weirauch et al.(2014)
pTH8991
0.712 0.712
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PTRK_0000574400.1 CSD 54 123

Links

Other CSD family TFs
Other Parastrongyloides trichosuri TFs

170 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SPAL_0000982100 Strongyloides papillosus SPAL_0000982100 I 0.939
SSTP_0000685800 Strongyloides stercoralis SSTP_0000685800 I 0.939
SVE_1573400 Strongyloides venezuelensis SVE_1573400 I 0.939
L892_g19487 Steinernema scapterisci L892_g19487 I 0.758
L889_g15794 Steinernema feltiae L889_g15794 I 0.758
L893_g29692 Steinernema glaseri L893_g29692 I 0.758
L596_g21676 Steinernema carpocapsae L596_g21676 I 0.758
L898_g6257 Steinernema monticolum L898_g6257 I 0.758
ENSSTOG00000008630 Ictidomys tridecemlineatus ENSSTOG00000008630 I 0.742
ENSSSCG00000030357 Sus scrofa ENSSSCG00000030357 I 0.742
YBX2 Sus scrofa ENSSSCG00000017938 I 0.742
YBX2 Tupaia belangeri ENSTBEG00000001266 I 0.742
YBX2 Loxodonta africana ENSLAFG00000014006 I 0.742
YBX2 Tetraodon nigroviridis ENSTNIG00000010139 I 0.742
Ybx2 Rattus norvegicus ENSRNOG00000017117 I 0.742
YBX2 Felis catus ENSFCAG00000018097 I 0.742
ENSTRUG00000011813 Takifugu rubripes ENSTRUG00000011813 I 0.742
Alligator_sinensis_CCG005029.1 Alligator sinensis Alligator_sinensis_CCG005029.1 I 0.742
YBX2 Gorilla gorilla ENSGGOG00000007399 I 0.742
ENSNLEG00000008063 Nomascus leucogenys ENSNLEG00000008063 I 0.742
YBX2 Procavia capensis ENSPCAG00000008019 I 0.742
ENSPANG00000024250 Papio anubis ENSPANG00000024250 I 0.742
YBX2 Otolemur garnettii ENSOGAG00000004392 I 0.742
YBX2 Ochotona princeps ENSOPRG00000013773 I 0.742
ENSOARG00000011562 Ovis aries ENSOARG00000011562 I 0.742
YBX2 Equus caballus ENSECAG00000009996 I 0.742
YBX2 Pan troglodytes ENSPTRG00000008673 I 0.742
ENSPSIG00000012364 Pelodiscus sinensis ENSPSIG00000012364 I 0.742
Ybx2 Mus musculus ENSMUSG00000018554 I 0.742
ENSMMUG00000022712 Macaca mulatta ENSMMUG00000022712 I 0.742
YBX2 Homo sapiens ENSG00000006047 I 0.742
YBX2 Cavia porcellus ENSCPOG00000009543 I 0.742
ENSCAFG00000016128 Canis familiaris ENSCAFG00000016128 I 0.742
ENSCSAG00000011857 Chlorocebus sabaeus ENSCSAG00000011857 I 0.742
ybx2 Xenopus tropicalis XB-GENE-5798907 I 0.742
Ogr10632 Ophisaurus gracilis Ogr10632 I 0.742
YBX2 Bos taurus ENSBTAG00000009126 I 0.742
YBX2 Dasypus novemcinctus ENSDNOG00000013746 I 0.742
ENSP00000007699-D1 Bos grunniens ENSP00000007699-D1 I 0.742
YBX2 Callithrix jacchus ENSCJAG00000016581 I 0.742
ENSAMEG00000016564 Ailuropoda melanoleuca ENSAMEG00000016564 I 0.742
ENSSHAG00000011350 Sarcophilus harrisii ENSSHAG00000011350 I 0.738
Cmyd_10003103 Chelonia mydas Cmyd_10003103 I 0.730
ybx1 Xenopus tropicalis XB-GENE-480746 I 0.727
CAA42778 Xenopus laevis CAA42778 I 0.727
AAI30161 Xenopus laevis AAI30161 I 0.727
Ybx3 Rattus norvegicus ENSRNOG00000005480 I 0.727
YBX3 Pteropus vampyrus ENSPVAG00000006740 I 0.727
YBX1 Pteropus vampyrus ENSPVAG00000005504 I 0.727
ENSPPYG00000004279 Pongo abelii ENSPPYG00000004279 I 0.727
ybx1.S Xenopus laevis XB-GENE-865405 I 0.727
ENSPANG00000016576 Papio anubis ENSPANG00000016576 I 0.727
ENSPANG00000013156 Papio anubis ENSPANG00000013156 I 0.727
ENSPANG00000010280 Papio anubis ENSPANG00000010280 I 0.727
ybx2.S Xenopus laevis XB-GENE-6254213 I 0.727
ybx2.L Xenopus laevis XB-GENE-6252609 I 0.727
ENSPSIG00000009247 Pelodiscus sinensis ENSPSIG00000009247 I 0.727
Ybx1 Rattus norvegicus ENSRNOG00000023786 I 0.727
ENSPFOG00000011441 Poecilia formosa ENSPFOG00000011441 I 0.727
ENSPFOG00000007181 Poecilia formosa ENSPFOG00000007181 I 0.727
ENSPSIG00000011017 Pelodiscus sinensis ENSPSIG00000011017 I 0.727
ENSSHAG00000014452 Sarcophilus harrisii ENSSHAG00000014452 I 0.727
ENSORLG00000006269 Oryzias latipes ENSORLG00000006269 I 0.727
YBX1 Vicugna pacos ENSVPAG00000000068 I 0.727
ybx1 Takifugu rubripes ENSTRUG00000015333 I 0.727
ENSP00000228251 Macaca fascicularis ENSP00000228251 I 0.727
ENSXMAG00000015755 Xiphophorus maculatus ENSXMAG00000015755 I 0.727
ENSXMAG00000018674 Xiphophorus maculatus ENSXMAG00000018674 I 0.727
Brh_R007443 Buceros rhinoceros Brh_R007443 I 0.727
Afo_R014263 Aptenodytes forsteri Afo_R014263 I 0.727
Aan_R014295 Calypte anna Aan_R014295 I 0.727
Aan_R001440 Calypte anna Aan_R001440 I 0.727
ybx1 Tetraodon nigroviridis ENSTNIG00000011989 I 0.727
YBX1 Taeniopygia guttata ENSTGUG00000017262 I 0.727
AAH42217 Xenopus laevis AAH42217 I 0.727
YBX3 Sus scrofa ENSSSCG00000000633 I 0.727
ENSBTAP00000012735-D1 Bos grunniens ENSBTAP00000012735-D1 I 0.727
ENSSHAG00000003262 Sarcophilus harrisii ENSSHAG00000003262 I 0.727
e_gw.440.24.1 Branchiostoma floridae e_gw.440.24.1 I 0.727
Pvit_10025 Pogona vitticeps Pvit_10025 I 0.727
YBX3 Taeniopygia guttata ENSTGUG00000012047 I 0.727
Gfo_R007354 Geospiza fortis Gfo_R007354 I 0.727
YBX3 Tupaia belangeri ENSTBEG00000012570 I 0.727
YBX2 Sorex araneus ENSSARG00000000488 I 0.727
ybx1 Oryzias latipes ENSORLG00000004225 I 0.727
ENSAMEG00000009393 Ailuropoda melanoleuca ENSAMEG00000009393 I 0.727
ENSFALG00000003661 Ficedula albicollis ENSFALG00000003661 I 0.727
YBX3 Echinops telfairi ENSETEG00000002557 I 0.727
YBX3 Erinaceus europaeus ENSEEUG00000010415 I 0.727
ENSECAG00000023592 Equus caballus ENSECAG00000023592 I 0.727
YBX1 Erinaceus europaeus ENSEEUG00000005657 I 0.727
YBX3 Felis catus ENSFCAG00000027748 I 0.727
YBX3 Homo sapiens ENSG00000060138 I 0.727
YBX1 Bos taurus ENSBTAG00000017368 I 0.727
YBX3 Gorilla gorilla ENSGGOG00000001352 I 0.727
YBX1 Gallus gallus ENSGALG00000004848 I 0.727
YBX2 Gasterosteus aculeatus ENSGACG00000019392 I 0.727
YBX1 Homo sapiens ENSG00000065978 D 0.727
ybx1 Gasterosteus aculeatus ENSGACG00000006447 I 0.727
YBX3 Equus caballus ENSECAG00000013777 I 0.727
ENSECAG00000011356 Equus caballus ENSECAG00000011356 I 0.727
ENSCJAG00000003155 Callithrix jacchus ENSCJAG00000003155 I 0.727
ENSCJAG00000021660 Callithrix jacchus ENSCJAG00000021660 I 0.727
YBX3 Choloepus hoffmanni ENSCHOG00000011988 I 0.727
YBX3 Bos taurus ENSBTAG00000009663 I 0.727
YBX1 Canis familiaris ENSCAFG00000002541 I 0.727
YBX3 Canis familiaris ENSCAFG00000013401 I 0.727
ENSAPLG00000003147 Anas platyrhynchos ENSAPLG00000003147 I 0.727
YBX1 Cavia porcellus ENSCPOG00000010888 I 0.727
ENSAMXG00000014478 Astyanax mexicanus ENSAMXG00000014478 I 0.727
ENSECAG00000008961 Equus caballus ENSECAG00000008961 I 0.727
Ybx3 Dipodomys ordii ENSDORG00000009103 I 0.727
ybx1 Danio rerio ENSDARG00000004757 I 0.727
YBX3 Cavia porcellus ENSCPOG00000011329 I 0.727
ENSCSAG00000008744 Chlorocebus sabaeus ENSCSAG00000008744 I 0.727
ENSGMOG00000007765 Gadus morhua ENSGMOG00000007765 I 0.727
ENSGALG00000018512 Gallus gallus ENSGALG00000018512 I 0.727
CRE01789 Caenorhabditis remanei CRE01789 I 0.727
Ybx3 Mus musculus ENSMUSG00000030189 I 0.727
Ybx1 Mus musculus ENSMUSG00000028639 I 0.727
ENSMODG00000022963 Monodelphis domestica ENSMODG00000022963 I 0.727
ENSGMOG00000015216 Gadus morhua ENSGMOG00000015216 I 0.727
ENSAMEG00000000494 Ailuropoda melanoleuca ENSAMEG00000000494 I 0.727
ENSNLEG00000012324 Nomascus leucogenys ENSNLEG00000012324 I 0.727
ENSOANG00000001663 Ornithorhynchus anatinus ENSOANG00000001663 I 0.727
YBX1 Otolemur garnettii ENSOGAG00000006784 I 0.727
ENSONIG00000002062 Oreochromis niloticus ENSONIG00000002062 I 0.727
ENSOARG00000020919 Ovis aries ENSOARG00000020919 I 0.727
CBN16711 Caenorhabditis brenneri CBN16711 I 0.727
YBX1 Ornithorhynchus anatinus ENSOANG00000011725 I 0.727
ENSOARG00000020447 Ovis aries ENSOARG00000020447 I 0.727
YBX2 Monodelphis domestica ENSMODG00000017596 I 0.727
YBX3 Monodelphis domestica ENSMODG00000018248 I 0.727
YBX1 Meleagris gallopavo ENSMGAG00000006879 I 0.727
YBX3 Meleagris gallopavo ENSMGAG00000014224 I 0.727
YBX1 Monodelphis domestica ENSMODG00000017214 I 0.727
ENSLAFG00000007597 Loxodonta africana ENSLAFG00000007597 I 0.727
ENSLOCG00000002530 Lepisosteus oculatus ENSLOCG00000002530 I 0.727
YBX3 Loxodonta africana ENSLAFG00000017247 I 0.727
ENSMICG00000014984 Microcebus murinus ENSMICG00000014984 I 0.727
ENSMMUG00000032563 Macaca mulatta ENSMMUG00000032563 I 0.727
ENSLACG00000018135 Latimeria chalumnae ENSLACG00000018135 I 0.727
YBX3 Macaca mulatta ENSMMUG00000022469 I 0.727
ENSMMUG00000013136 Macaca mulatta ENSMMUG00000013136 I 0.727
TMUE_s0011007500 Trichuris muris TMUE_s0011007500 I 0.712
D918_04890 Trichuris suis D918_04890 I 0.712
TTRE_0000405201 Trichuris trichiura TTRE_0000405201 I 0.712
RSKR_0000861200 Rhabditophanes kr3021 RSKR_0000861200 I 0.712
ENSAMXG00000007090 Astyanax mexicanus ENSAMXG00000007090 I 0.712
PTRK_0000206200 Parastrongyloides trichosuri PTRK_0000206200 I 0.712
SBAD_0000071701 Soboliphyme baturini SBAD_0000071701 I 0.712
ENSAPLG00000004899 Anas platyrhynchos ENSAPLG00000004899 I 0.712
DME_0000984901 Dracunculus medinensis DME_0000984901 I 0.712
NEMVEDRAFT_v1g104083 Nematostella vectensis NEMVEDRAFT_v1g104083 D 0.712
YBX1 Pan troglodytes ENSPTRG00000006456 I 0.712
ENSLOCG00000013819 Lepisosteus oculatus ENSLOCG00000013819 I 0.712
ENSPSIG00000009540 Pelodiscus sinensis ENSPSIG00000009540 I 0.712
YBX3 Procavia capensis ENSPCAG00000001397 I 0.712
ENSONIG00000018954 Oreochromis niloticus ENSONIG00000018954 I 0.712
ENSPANG00000019627 Papio anubis ENSPANG00000019627 I 0.712
CBG02981 Caenorhabditis briggsae CBG02981 I 0.712
Ppa-cey-1 Pristionchus pacificus PPA28011 I 0.712
Sakowv30002198m.g Saccoglossus kowalevskii Sakowv30002198m.g I 0.712
ybx3 Xenopus tropicalis XB-GENE-1007558 I 0.712
ENSCJAG00000031891 Callithrix jacchus ENSCJAG00000031891 I 0.712
ENSMMUP00000017257 Macaca fascicularis ENSMMUP00000017257 I 0.712
cey-1 Caenorhabditis elegans WBGene00000472 D 0.712
ENSCAFG00000017286 Canis familiaris ENSCAFG00000017286 I 0.712
Tal_R003478 Tyto alba Tal_R003478 I 0.703
YBX3 Tursiops truncatus ENSTTRG00000008045 I 0.702