CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RBPJL
(
Callithrix jacchus
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF09271 (LAG1-DNAbind)
IPR015351
ENSCJAG00000017526
T166036_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Rbpjl
M09519_2.00
Mus musculus
NDTTCCCABR
YVTGGGAAHN
Misc
Heinz et al.(2010)
Panc1-Rbpj1_GSE47459
0.894
0.894
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000032316
CSL
70
207
VRILHAKVAQKSYGNEKRFFCPPPCVYLSGPGWRVKPGQDQAHQAGETGPTVCGYMGLDSASGSAAETQKLNFEQQSDSREFGCTKTLYISDADKRKHFRLVLRLVLRGGRELGTFHSRLIKVISKPSQKKQSLKNTD
ENSCJAP00000032317
CSL
56
193
VRILHAKVAQKSYGNEKRFFCPPPCVYLSGPGWRVKPGQDQAHQAGETGPTVCGYMGLDSASGSAAETQKLNFEQQSDSREFGCTKTLYISDADKRKHFRLVLRLVLRGGRELGTFHSRLIKVISKPSQKKQSLKNTD
Links
Other
CSL
family TFs
Other
Callithrix jacchus
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_16726
Ancylostoma caninum
ANCCAN_16726
N
0.000
ANCCAN_19523
Ancylostoma caninum
ANCCAN_19523
N
0.000
ANCDUO_15776
Ancylostoma duodenale
ANCDUO_15776
N
0.000
ANCDUO_22234
Ancylostoma duodenale
ANCDUO_22234
N
0.000
DICVIV_02780
Dictyocaulus viviparus
DICVIV_02780
N
0.000
HCOI00372900
Haemonchus contortus
HCOI00372900
N
0.000
HCOI01155300
Haemonchus contortus
HCOI01155300
N
0.000
HCOI01510100
Haemonchus contortus
HCOI01510100
N
0.000
OESDEN_10488
Oesophagostomum dentatum
OESDEN_10488
N
0.000